Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PDS5AQ29RF7 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
PDS5AQ29RF7 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PDS5AQ29RF7 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
PDS5AQ29RF7 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
PDS5AQ29RF7 AL596244.1-201ENST00000567068 3779 ntBASIC7.81□□□□□ -1.16
PDS5AQ29RF7 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.81□□□□□ -1.16
PDS5AQ29RF7 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.81□□□□□ -1.16
PDS5AQ29RF7 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PDS5AQ29RF7 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 SNORD16-201ENST00000362803 99 ntBASIC7.8□□□□□ -1.16
PDS5AQ29RF7 RN7SKP237-201ENST00000364663 301 ntBASIC7.8□□□□□ -1.16
PDS5AQ29RF7 RNA5SP279-201ENST00000365513 117 ntBASIC7.8□□□□□ -1.16
PDS5AQ29RF7 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 AC021006.1-201ENST00000489849 553 ntBASIC7.8□□□□□ -1.16
PDS5AQ29RF7 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 RNA5SP441-201ENST00000516809 88 ntBASIC7.8□□□□□ -1.16
PDS5AQ29RF7 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 AC004232.2-201ENST00000574245 821 ntBASIC7.8□□□□□ -1.16
PDS5AQ29RF7 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 AC020765.1-201ENST00000604296 328 ntBASIC7.8□□□□□ -1.16
PDS5AQ29RF7 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 AL357140.4-201ENST00000636827 412 ntBASIC7.8□□□□□ -1.16
PDS5AQ29RF7 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 LPAL2-203ENST00000454031 2498 ntBASIC7.8□□□□□ -1.16
PDS5AQ29RF7 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 RAD17P2-201ENST00000451754 1977 ntBASIC7.8□□□□□ -1.16
PDS5AQ29RF7 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDS5AQ29RF7 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 AC094019.1-201ENST00000434678 472 ntBASIC7.79□□□□□ -1.16
PDS5AQ29RF7 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 GTF2IP14-201ENST00000441415 586 ntBASIC7.79□□□□□ -1.16
PDS5AQ29RF7 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 PFN1P8-201ENST00000497012 543 ntBASIC7.79□□□□□ -1.16
PDS5AQ29RF7 HMGN1P17-201ENST00000513734 295 ntBASIC7.79□□□□□ -1.16
PDS5AQ29RF7 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 AC084121.1-201ENST00000533882 835 ntBASIC7.79□□□□□ -1.16
PDS5AQ29RF7 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 AC006512.2-201ENST00000543250 486 ntBASIC7.79□□□□□ -1.16
PDS5AQ29RF7 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 TPRX1P1-201ENST00000557620 319 ntBASIC7.79□□□□□ -1.16
PDS5AQ29RF7 AC134669.1-201ENST00000581275 672 ntBASIC7.79□□□□□ -1.16
PDS5AQ29RF7 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 AC023245.2-201ENST00000530760 2978 ntBASIC7.79□□□□□ -1.16
PDS5AQ29RF7 AL391262.1-201ENST00000556558 1992 ntBASIC7.79□□□□□ -1.16
PDS5AQ29RF7 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.79□□□□□ -1.16
PDS5AQ29RF7 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDS5AQ29RF7 MAPK10-344ENST00000641718 3746 ntBASIC7.79□□□□□ -1.16
PDS5AQ29RF7 RAB5CP1-201ENST00000395972 580 ntBASIC7.78□□□□□ -1.16
PDS5AQ29RF7 AL157702.1-201ENST00000398764 426 ntBASIC7.78□□□□□ -1.16
PDS5AQ29RF7 RN7SKP108-201ENST00000411367 328 ntBASIC7.78□□□□□ -1.16
PDS5AQ29RF7 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.78□□□□□ -1.16
PDS5AQ29RF7 AC092865.3-201ENST00000425390 1026 ntBASIC7.78□□□□□ -1.16
PDS5AQ29RF7 AC108479.1-201ENST00000431142 427 ntBASIC7.78□□□□□ -1.16
PDS5AQ29RF7 AC112492.2-201ENST00000432774 1030 ntBASIC7.78□□□□□ -1.16
PDS5AQ29RF7 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.78□□□□□ -1.16
PDS5AQ29RF7 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC7.78□□□□□ -1.16
PDS5AQ29RF7 RPL5P7-201ENST00000444235 813 ntBASIC7.78□□□□□ -1.16
PDS5AQ29RF7 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.78□□□□□ -1.16
PDS5AQ29RF7 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.78□□□□□ -1.16
PDS5AQ29RF7 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.78□□□□□ -1.16
PDS5AQ29RF7 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms