RNA–Protein interactions for RNA: ENST00000532404.5

USP50-203, Transcript of ubiquitin specific peptidase 50, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USP50, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP50-203ENST00000532404 AEBP2Q6ZN18 517 aaPredicted RBP27.73■■■□□ 2.03
USP50-203ENST00000532404 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
USP50-203ENST00000532404 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
USP50-203ENST00000532404 PHF23Q9BUL5 403 aaPredicted RBP23.37■■□□□ 1.33
USP50-203ENST00000532404 FOXD1Q16676 465 aa22.06■■□□□ 1.12
USP50-203ENST00000532404 PLPPR3Q6T4P5 718 aa21.07■□□□□ 0.96
USP50-203ENST00000532404 MSH5O43196 834 aa20.69■□□□□ 0.9
USP50-203ENST00000532404 PPP6R1Q9UPN7 881 aa20.6■□□□□ 0.89
USP50-203ENST00000532404 PIAS4Q8N2W9 510 aaPredicted RBP20.58■□□□□ 0.88
USP50-203ENST00000532404 ADRA2BP18089 450 aa20.51■□□□□ 0.87
USP50-203ENST00000532404 POTEDQ86YR6 584 aa20.16■□□□□ 0.82
USP50-203ENST00000532404 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
USP50-203ENST00000532404 MAPK8IP2Q13387 824 aaPredicted RBP18.83■□□□□ 0.61
USP50-203ENST00000532404 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
USP50-203ENST00000532404 PPP4R3CPQ6ZMV5 832 aa18.44■□□□□ 0.54
USP50-203ENST00000532404 HOXD11P31277 338 aaPredicted RBP18.14■□□□□ 0.49
USP50-203ENST00000532404 CNKSR2Q8WXI2 1034 aa18.13■□□□□ 0.49
USP50-203ENST00000532404 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
USP50-203ENST00000532404 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
USP50-203ENST00000532404 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
USP50-203ENST00000532404 CACNB1Q02641 598 aaPredicted RBP17.69■□□□□ 0.42
USP50-203ENST00000532404 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
USP50-203ENST00000532404 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
USP50-203ENST00000532404 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
USP50-203ENST00000532404 C1QBPQ07021 282 aaKnown RBP17.41■□□□□ 0.38
USP50-203ENST00000532404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.34
USP50-203ENST00000532404 KCNA4P22459 653 aa17.1■□□□□ 0.33
USP50-203ENST00000532404 U3KPZ7 1027 aaPredicted RBP16.86■□□□□ 0.29
USP50-203ENST00000532404 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
USP50-203ENST00000532404 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
USP50-203ENST00000532404 CAPN15O75808 1086 aa16.53■□□□□ 0.24
USP50-203ENST00000532404 DSG3P32926 999 aa16.51■□□□□ 0.23
USP50-203ENST00000532404 APLP2Q06481 763 aa16.44■□□□□ 0.22
USP50-203ENST00000532404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
USP50-203ENST00000532404 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
USP50-203ENST00000532404 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
USP50-203ENST00000532404 ZNF219Q9P2Y4 722 aaPredicted RBP16.31■□□□□ 0.2
USP50-203ENST00000532404 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
USP50-203ENST00000532404 MYCNP04198 464 aaPredicted RBP16.18■□□□□ 0.18
USP50-203ENST00000532404 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
USP50-203ENST00000532404 ABCB7O75027 752 aa16.13■□□□□ 0.17
USP50-203ENST00000532404 FOXD4L1Q9NU39 408 aa16■□□□□ 0.15
USP50-203ENST00000532404 POLA2Q14181 598 aa15.86■□□□□ 0.13
USP50-203ENST00000532404 POTEHQ6S545 545 aa15.79■□□□□ 0.12
USP50-203ENST00000532404 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
USP50-203ENST00000532404 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
USP50-203ENST00000532404 ZBTB22O15209 634 aa15.72■□□□□ 0.11
USP50-203ENST00000532404 ZBTB12Q9Y330 459 aaPredicted RBP15.61■□□□□ 0.09
USP50-203ENST00000532404 ATXN8OSP0DMR3 200 aa15.58■□□□□ 0.08
USP50-203ENST00000532404 AKT1S1Q96B36 256 aa15.42■□□□□ 0.06
USP50-203ENST00000532404 CHRDL2Q6WN34 429 aa15.39■□□□□ 0.05
USP50-203ENST00000532404 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
USP50-203ENST00000532404 REM2Q8IYK8 340 aaPredicted RBP15.24■□□□□ 0.03
USP50-203ENST00000532404 FBLN2P98095 1184 aa15.18■□□□□ 0.02
USP50-203ENST00000532404 SPDYE2BA6NHP3 402 aa15.11■□□□□ 0.01
USP50-203ENST00000532404 SPDYE6P0CI01 402 aa15.11■□□□□ 0.01
USP50-203ENST00000532404 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
USP50-203ENST00000532404 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
USP50-203ENST00000532404 PITPNM1O00562 1244 aa15.05■□□□□ -0
USP50-203ENST00000532404 PIP4P2Q8N4L2 257 aa15.02■□□□□ -0
USP50-203ENST00000532404 CSRNP3Q8WYN3 585 aa15.01□□□□□ -0.01
USP50-203ENST00000532404 FXR2P51116 673 aaKnown RBP eCLIP14.98□□□□□ -0.01
USP50-203ENST00000532404 SSUH2Q9Y2M2 353 aa14.92□□□□□ -0.02
USP50-203ENST00000532404 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
USP50-203ENST00000532404 SPDYE1Q8NFV5 336 aaPredicted RBP14.84□□□□□ -0.03
USP50-203ENST00000532404 SP7Q8TDD2 431 aaPredicted RBP14.81□□□□□ -0.04
USP50-203ENST00000532404 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
USP50-203ENST00000532404 HAX1O00165 279 aa14.72□□□□□ -0.05
USP50-203ENST00000532404 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.06
USP50-203ENST00000532404 PRKAR2AP13861 404 aaKnown RBP14.65□□□□□ -0.06
USP50-203ENST00000532404 PABPN1Q86U42 306 aaKnown RBP eCLIP14.65□□□□□ -0.06
USP50-203ENST00000532404 NISCHQ9Y2I1 1504 aa14.61□□□□□ -0.07
USP50-203ENST00000532404 EVX2Q03828 476 aa14.55□□□□□ -0.08
USP50-203ENST00000532404 PRR29P0C7W0 189 aa14.53□□□□□ -0.08
USP50-203ENST00000532404 C19orf67A6NJJ6 358 aa14.49□□□□□ -0.09
USP50-203ENST00000532404 CHADLQ6NUI6 762 aa14.45□□□□□ -0.1
USP50-203ENST00000532404 SPDYE4A6NLX3 237 aa14.33□□□□□ -0.12
USP50-203ENST00000532404 STAG3Q9UJ98 1225 aa14.32□□□□□ -0.12
USP50-203ENST00000532404 FARP1Q9Y4F1 1045 aaPredicted RBP14.3□□□□□ -0.12
USP50-203ENST00000532404 GABBR2O75899 941 aa14.25□□□□□ -0.13
USP50-203ENST00000532404 CD44P16070 742 aaKnown RBP14.19□□□□□ -0.14
USP50-203ENST00000532404 CREBZFQ9NS37 354 aa14.19□□□□□ -0.14
USP50-203ENST00000532404 CLCN6P51797 869 aa14.13□□□□□ -0.15
USP50-203ENST00000532404 PROM2Q8N271 834 aa14.08□□□□□ -0.16
USP50-203ENST00000532404 ZNF579Q8NAF0 562 aaKnown RBP14.03□□□□□ -0.16
USP50-203ENST00000532404 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
USP50-203ENST00000532404 MNX1P50219 401 aaPredicted RBP13.96□□□□□ -0.17
USP50-203ENST00000532404 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
USP50-203ENST00000532404 POTEIP0CG38 1075 aa13.95□□□□□ -0.18
USP50-203ENST00000532404 PAK3O75914 559 aaPredicted RBP13.88□□□□□ -0.19
USP50-203ENST00000532404 LHX8Q68G74 356 aa13.88□□□□□ -0.19
USP50-203ENST00000532404 DCBLD2Q96PD2 775 aa13.83□□□□□ -0.19
USP50-203ENST00000532404 GALR2O43603 387 aaPredicted RBP13.79□□□□□ -0.2
USP50-203ENST00000532404 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
USP50-203ENST00000532404 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
USP50-203ENST00000532404 MIER1Q8N108 512 aa13.65□□□□□ -0.22
USP50-203ENST00000532404 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
USP50-203ENST00000532404 MS4A3Q96HJ5 214 aa13.61□□□□□ -0.23
USP50-203ENST00000532404 TSPYL2Q9H2G4 693 aaPredicted RBP13.61□□□□□ -0.23
USP50-203ENST00000532404 FKBP8Q14318 412 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms