RNA–Protein interactions for RNA: ENST00000395972.2

RAB5CP1-201, Transcript of RAB5C, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB5CP1, Length 580 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP1-201ENST00000395972 AEBP2Q6ZN18 517 aaPredicted RBP19.89■□□□□ 0.77
RAB5CP1-201ENST00000395972 CHIC1Q5VXU3 224 aa18.99■□□□□ 0.63
RAB5CP1-201ENST00000395972 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
RAB5CP1-201ENST00000395972 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
RAB5CP1-201ENST00000395972 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
RAB5CP1-201ENST00000395972 ABCC9O60706 1549 aa16.67■□□□□ 0.26
RAB5CP1-201ENST00000395972 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
RAB5CP1-201ENST00000395972 DNAJC5Q9H3Z4 198 aa15.89■□□□□ 0.13
RAB5CP1-201ENST00000395972 PLPPR3Q6T4P5 718 aa15.88■□□□□ 0.13
RAB5CP1-201ENST00000395972 FOXD1Q16676 465 aa15.86■□□□□ 0.13
RAB5CP1-201ENST00000395972 CCDC180Q9P1Z9 1646 aa15.48■□□□□ 0.07
RAB5CP1-201ENST00000395972 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
RAB5CP1-201ENST00000395972 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
RAB5CP1-201ENST00000395972 CECR2Q9BXF3 1484 aa15.09■□□□□ 0.01
RAB5CP1-201ENST00000395972 DCAF8L2P0C7V8 631 aa14.98□□□□□ -0.01
RAB5CP1-201ENST00000395972 NACADO15069 1562 aa14.94□□□□□ -0.02
RAB5CP1-201ENST00000395972 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
RAB5CP1-201ENST00000395972 CC2D2AQ9P2K1 1620 aa14.91□□□□□ -0.02
RAB5CP1-201ENST00000395972 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
RAB5CP1-201ENST00000395972 MSH5O43196 834 aa14.86□□□□□ -0.03
RAB5CP1-201ENST00000395972 UNC13AQ9UPW8 1703 aa14.83□□□□□ -0.03
RAB5CP1-201ENST00000395972 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
RAB5CP1-201ENST00000395972 PIAS4Q8N2W9 510 aaPredicted RBP14.82□□□□□ -0.04
RAB5CP1-201ENST00000395972 PPP6R1Q9UPN7 881 aa14.76□□□□□ -0.05
RAB5CP1-201ENST00000395972 ADRA2BP18089 450 aa14.74□□□□□ -0.05
RAB5CP1-201ENST00000395972 POTEDQ86YR6 584 aa14.73□□□□□ -0.05
RAB5CP1-201ENST00000395972 KCNA4P22459 653 aa14.72□□□□□ -0.05
RAB5CP1-201ENST00000395972 CUX2O14529 1486 aa14.68□□□□□ -0.06
RAB5CP1-201ENST00000395972 EIF4G1Q04637 1599 aaKnown RBP14.63□□□□□ -0.07
RAB5CP1-201ENST00000395972 SHROOM4Q9ULL8 1493 aa14.52□□□□□ -0.08
RAB5CP1-201ENST00000395972 ERCC6Q03468 1493 aa14.47□□□□□ -0.09
RAB5CP1-201ENST00000395972 MYO15BQ96JP2 1530 aa14.35□□□□□ -0.11
RAB5CP1-201ENST00000395972 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
RAB5CP1-201ENST00000395972 CSRNP3Q8WYN3 585 aa14.25□□□□□ -0.13
RAB5CP1-201ENST00000395972 SCRIBQ14160 1630 aa14.24□□□□□ -0.13
RAB5CP1-201ENST00000395972 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
RAB5CP1-201ENST00000395972 PPP4R3CPQ6ZMV5 832 aa14.05□□□□□ -0.16
RAB5CP1-201ENST00000395972 NESP48681 1621 aa14.01□□□□□ -0.17
RAB5CP1-201ENST00000395972 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
RAB5CP1-201ENST00000395972 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
RAB5CP1-201ENST00000395972 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
RAB5CP1-201ENST00000395972 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
RAB5CP1-201ENST00000395972 NCAPD3P42695 1498 aa13.85□□□□□ -0.19
RAB5CP1-201ENST00000395972 ILDR1Q86SU0 546 aaPredicted RBP13.84□□□□□ -0.19
RAB5CP1-201ENST00000395972 BAZ1AQ9NRL2 1556 aaPredicted RBP13.83□□□□□ -0.2
RAB5CP1-201ENST00000395972 DCAF1Q9Y4B6 1507 aa13.82□□□□□ -0.2
RAB5CP1-201ENST00000395972 RIMBP3CA6NJZ7 1639 aa13.77□□□□□ -0.21
RAB5CP1-201ENST00000395972 RIMBP3BA6NNM3 1639 aa13.77□□□□□ -0.21
RAB5CP1-201ENST00000395972 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
RAB5CP1-201ENST00000395972 RIMBP3Q9UFD9 1639 aa13.77□□□□□ -0.21
RAB5CP1-201ENST00000395972 CYB5RLQ6IPT4 315 aa13.76□□□□□ -0.21
RAB5CP1-201ENST00000395972 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
RAB5CP1-201ENST00000395972 PDS5BQ9NTI5 1447 aa13.7□□□□□ -0.22
RAB5CP1-201ENST00000395972 ATAD2BQ9ULI0 1458 aa13.69□□□□□ -0.22
RAB5CP1-201ENST00000395972 KIF21AQ7Z4S6 1674 aa13.68□□□□□ -0.22
RAB5CP1-201ENST00000395972 LAMC3Q9Y6N6 1575 aa13.66□□□□□ -0.22
RAB5CP1-201ENST00000395972 ARHGEF11O15085 1522 aa13.65□□□□□ -0.22
RAB5CP1-201ENST00000395972 MRC2Q9UBG0 1479 aa13.62□□□□□ -0.23
RAB5CP1-201ENST00000395972 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
RAB5CP1-201ENST00000395972 HMGXB3Q12766 1538 aa13.6□□□□□ -0.23
RAB5CP1-201ENST00000395972 MAPK8IP2Q13387 824 aaPredicted RBP13.58□□□□□ -0.24
RAB5CP1-201ENST00000395972 WDR62O43379 1518 aa13.56□□□□□ -0.24
RAB5CP1-201ENST00000395972 ZBTB22O15209 634 aa13.54□□□□□ -0.24
RAB5CP1-201ENST00000395972 BAZ1BQ9UIG0 1483 aaKnown RBP13.53□□□□□ -0.24
RAB5CP1-201ENST00000395972 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
RAB5CP1-201ENST00000395972 ARAP1Q96P48 1450 aa13.46□□□□□ -0.25
RAB5CP1-201ENST00000395972 SCAF1Q9H7N4 1312 aaKnown RBP13.45□□□□□ -0.26
RAB5CP1-201ENST00000395972 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
RAB5CP1-201ENST00000395972 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
RAB5CP1-201ENST00000395972 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
RAB5CP1-201ENST00000395972 FOXD4L1Q9NU39 408 aa13.38□□□□□ -0.27
RAB5CP1-201ENST00000395972 CEP164Q9UPV0 1460 aa13.37□□□□□ -0.27
RAB5CP1-201ENST00000395972 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
RAB5CP1-201ENST00000395972 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
RAB5CP1-201ENST00000395972 FANCD2Q9BXW9 1451 aa13.28□□□□□ -0.28
RAB5CP1-201ENST00000395972 FBLN2P98095 1184 aa13.27□□□□□ -0.29
RAB5CP1-201ENST00000395972 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
RAB5CP1-201ENST00000395972 RSF1Q96T23 1441 aaPredicted RBP13.23□□□□□ -0.29
RAB5CP1-201ENST00000395972 URB2Q14146 1524 aaKnown RBP13.21□□□□□ -0.29
RAB5CP1-201ENST00000395972 KDM4FA0A1W2PPD8 638 aa13.19□□□□□ -0.3
RAB5CP1-201ENST00000395972 PEG3Q9GZU2 1588 aa13.19□□□□□ -0.3
RAB5CP1-201ENST00000395972 IFT140Q96RY7 1462 aa13.13□□□□□ -0.31
RAB5CP1-201ENST00000395972 CHD1O14646 1710 aa13.1□□□□□ -0.31
RAB5CP1-201ENST00000395972 FBXO41Q8TF61 875 aa13.08□□□□□ -0.32
RAB5CP1-201ENST00000395972 LMTK3Q96Q04 1460 aa13.05□□□□□ -0.32
RAB5CP1-201ENST00000395972 DCAF8L1A6NGE4 600 aa13.05□□□□□ -0.32
RAB5CP1-201ENST00000395972 MROH2BQ7Z745 1585 aa13.05□□□□□ -0.32
RAB5CP1-201ENST00000395972 EIF4G3O43432 1585 aaKnown RBP13.04□□□□□ -0.32
RAB5CP1-201ENST00000395972 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.32
RAB5CP1-201ENST00000395972 CFTRP13569 1480 aa13.03□□□□□ -0.32
RAB5CP1-201ENST00000395972 RNF216Q9NWF9 866 aaPredicted RBP13.02□□□□□ -0.33
RAB5CP1-201ENST00000395972 SOCS7O14512 581 aa12.99□□□□□ -0.33
RAB5CP1-201ENST00000395972 GAPVD1Q14C86 1478 aa12.98□□□□□ -0.33
RAB5CP1-201ENST00000395972 ERCC6L2Q5T890 1561 aa12.96□□□□□ -0.33
RAB5CP1-201ENST00000395972 CLASP1Q7Z460 1538 aa12.95□□□□□ -0.34
RAB5CP1-201ENST00000395972 CHMP7Q8WUX9 453 aaPredicted RBP12.94□□□□□ -0.34
RAB5CP1-201ENST00000395972 HECW2Q9P2P5 1572 aa12.91□□□□□ -0.34
RAB5CP1-201ENST00000395972 ILDR2Q71H61 639 aa12.91□□□□□ -0.34
RAB5CP1-201ENST00000395972 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
RAB5CP1-201ENST00000395972 CACNB1Q02641 598 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms