Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC8.45□□□□□ -1.06
ERCC3P19447 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
ERCC3P19447 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
ERCC3P19447 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
ERCC3P19447 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 AC079298.1-201ENST00000625026 1619 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
ERCC3P19447 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 OR13C3-201ENST00000374781 1108 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 SNORA70.8-201ENST00000384231 136 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 RNU6-1005P-201ENST00000384519 107 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC8.44□□□□□ -1.06
ERCC3P19447 AL390879.1-201ENST00000439143 386 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 SOCS5P1-201ENST00000440415 949 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 AL031313.1-201ENST00000448435 256 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 YRDCP3-201ENST00000456507 480 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 RN7SL267P-201ENST00000485107 261 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 RPL9P15-201ENST00000491096 532 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 RN7SL569P-201ENST00000494652 288 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 TECRP2-201ENST00000503270 928 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 BMS1P15-201ENST00000554269 1141 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC8.44□□□□□ -1.06
ERCC3P19447 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC8.44□□□□□ -1.06
ERCC3P19447 OOSP1P2-201ENST00000579644 351 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 MTCO2P22-201ENST00000603246 681 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 AP002802.2-201ENST00000605877 235 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 AC097478.2-201ENST00000610572 514 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.44□□□□□ -1.06
ERCC3P19447 AC078909.2-201ENST00000620584 398 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 AC006963.1-201ENST00000624003 1052 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 AL590396.3-201ENST00000636334 300 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
ERCC3P19447 CASC19-274ENST00000642018 970 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC8.44□□□□□ -1.06
ERCC3P19447 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC8.44□□□□□ -1.06
ERCC3P19447 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
ERCC3P19447 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
ERCC3P19447 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
ERCC3P19447 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 AL137058.3-201ENST00000624531 3099 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
ERCC3P19447 AL359715.3-201ENST00000569267 2123 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
ERCC3P19447 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ERCC3P19447 AC092701.1-201ENST00000623627 1551 ntBASIC8.44□□□□□ -1.06
ERCC3P19447 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC8.44□□□□□ -1.06
ERCC3P19447 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.43□□□□□ -1.06
ERCC3P19447 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.43□□□□□ -1.06
ERCC3P19447 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ERCC3P19447 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
ERCC3P19447 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
ERCC3P19447 AC073342.2-201ENST00000595842 1800 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ERCC3P19447 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ERCC3P19447 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ERCC3P19447 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ERCC3P19447 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ERCC3P19447 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ERCC3P19447 RN7SKP74-201ENST00000362849 309 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 RNU12-2P-201ENST00000364789 156 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 RNU6-207P-201ENST00000384137 107 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 SNORA3.1-201ENST00000408166 111 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC8.43□□□□□ -1.06
ERCC3P19447 RNU2-17P-201ENST00000410290 190 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 AL592310.1-201ENST00000414330 671 ntBASIC8.43□□□□□ -1.06
ERCC3P19447 TEX41-203ENST00000420472 765 ntTSL 3 BASIC8.43□□□□□ -1.06
ERCC3P19447 NANOGP5-201ENST00000424456 877 ntBASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms