RNA–Protein interactions for RNA: ENST00000305625.2

MBD3L1-201, Transcript of methyl-CpG binding domain protein 3 like 1, humanhuman

APPRIS P1 BASIC

Gene MBD3L1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1-201ENST00000305625 CHIC1Q5VXU3 224 aa19.87■□□□□ 0.77
MBD3L1-201ENST00000305625 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
MBD3L1-201ENST00000305625 PHF23Q9BUL5 403 aaPredicted RBP17.51■□□□□ 0.39
MBD3L1-201ENST00000305625 NISCHQ9Y2I1 1504 aa17.27■□□□□ 0.36
MBD3L1-201ENST00000305625 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
MBD3L1-201ENST00000305625 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
MBD3L1-201ENST00000305625 FOXD1Q16676 465 aa15.51■□□□□ 0.07
MBD3L1-201ENST00000305625 ADRA2BP18089 450 aa15.34■□□□□ 0.05
MBD3L1-201ENST00000305625 PPP6R1Q9UPN7 881 aa15.31■□□□□ 0.04
MBD3L1-201ENST00000305625 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
MBD3L1-201ENST00000305625 POTEDQ86YR6 584 aa14.94□□□□□ -0.02
MBD3L1-201ENST00000305625 PIAS4Q8N2W9 510 aaPredicted RBP14.78□□□□□ -0.04
MBD3L1-201ENST00000305625 MSH5O43196 834 aa14.7□□□□□ -0.06
MBD3L1-201ENST00000305625 KCNA4P22459 653 aa14.68□□□□□ -0.06
MBD3L1-201ENST00000305625 ABCC9O60706 1549 aa14.67□□□□□ -0.06
MBD3L1-201ENST00000305625 PPP4R3CPQ6ZMV5 832 aa14.48□□□□□ -0.09
MBD3L1-201ENST00000305625 DCAF8L2P0C7V8 631 aa14.45□□□□□ -0.1
MBD3L1-201ENST00000305625 ZCCHC6Q5VYS8 1495 aaKnown RBP14.44□□□□□ -0.1
MBD3L1-201ENST00000305625 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
MBD3L1-201ENST00000305625 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
MBD3L1-201ENST00000305625 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
MBD3L1-201ENST00000305625 NACADO15069 1562 aa14.2□□□□□ -0.14
MBD3L1-201ENST00000305625 MYO15BQ96JP2 1530 aa14.16□□□□□ -0.14
MBD3L1-201ENST00000305625 RB1CC1Q8TDY2 1594 aa14.14□□□□□ -0.15
MBD3L1-201ENST00000305625 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
MBD3L1-201ENST00000305625 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
MBD3L1-201ENST00000305625 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
MBD3L1-201ENST00000305625 CNKSR2Q8WXI2 1034 aa13.98□□□□□ -0.17
MBD3L1-201ENST00000305625 SHROOM4Q9ULL8 1493 aa13.96□□□□□ -0.17
MBD3L1-201ENST00000305625 SCRIBQ14160 1630 aa13.94□□□□□ -0.18
MBD3L1-201ENST00000305625 UNC13AQ9UPW8 1703 aa13.85□□□□□ -0.19
MBD3L1-201ENST00000305625 PABPN1Q86U42 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
MBD3L1-201ENST00000305625 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
MBD3L1-201ENST00000305625 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.21
MBD3L1-201ENST00000305625 BICRAQ9NZM4 1560 aa13.77□□□□□ -0.21
MBD3L1-201ENST00000305625 RNF216Q9NWF9 866 aaPredicted RBP13.57□□□□□ -0.24
MBD3L1-201ENST00000305625 DNAJC5BQ9UF47 199 aa13.51□□□□□ -0.25
MBD3L1-201ENST00000305625 CECR2Q9BXF3 1484 aa13.49□□□□□ -0.25
MBD3L1-201ENST00000305625 ZBTB22O15209 634 aa13.48□□□□□ -0.25
MBD3L1-201ENST00000305625 DMRT2Q9Y5R5 561 aa13.47□□□□□ -0.25
MBD3L1-201ENST00000305625 FOXD4L1Q9NU39 408 aa13.38□□□□□ -0.27
MBD3L1-201ENST00000305625 SUPT5HO00267 1087 aaKnown RBP13.37□□□□□ -0.27
MBD3L1-201ENST00000305625 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
MBD3L1-201ENST00000305625 MROH2BQ7Z745 1585 aa13.36□□□□□ -0.27
MBD3L1-201ENST00000305625 EIF4G1Q04637 1599 aaKnown RBP13.35□□□□□ -0.27
MBD3L1-201ENST00000305625 BAZ1AQ9NRL2 1556 aaPredicted RBP13.33□□□□□ -0.28
MBD3L1-201ENST00000305625 SMARCA4P51532 1647 aa13.32□□□□□ -0.28
MBD3L1-201ENST00000305625 RSF1Q96T23 1441 aaPredicted RBP13.31□□□□□ -0.28
MBD3L1-201ENST00000305625 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
MBD3L1-201ENST00000305625 WIZO95785 1651 aa13.22□□□□□ -0.29
MBD3L1-201ENST00000305625 ATAD2BQ9ULI0 1458 aa13.21□□□□□ -0.3
MBD3L1-201ENST00000305625 PEG3Q9GZU2 1588 aa13.15□□□□□ -0.3
MBD3L1-201ENST00000305625 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
MBD3L1-201ENST00000305625 NCAPD3P42695 1498 aa13.14□□□□□ -0.31
MBD3L1-201ENST00000305625 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
MBD3L1-201ENST00000305625 BAZ1BQ9UIG0 1483 aaKnown RBP13.1□□□□□ -0.31
MBD3L1-201ENST00000305625 HMGXB3Q12766 1538 aa13.05□□□□□ -0.32
MBD3L1-201ENST00000305625 TOP2AP11388 1531 aaKnown RBP13.04□□□□□ -0.32
MBD3L1-201ENST00000305625 CCDC88BA6NC98 1476 aa12.96□□□□□ -0.34
MBD3L1-201ENST00000305625 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
MBD3L1-201ENST00000305625 DCAF8L1A6NGE4 600 aa12.94□□□□□ -0.34
MBD3L1-201ENST00000305625 ATXN8OSP0DMR3 200 aa12.88□□□□□ -0.35
MBD3L1-201ENST00000305625 CACNB1Q02641 598 aaPredicted RBP12.87□□□□□ -0.35
MBD3L1-201ENST00000305625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
MBD3L1-201ENST00000305625 NESP48681 1621 aa12.8□□□□□ -0.36
MBD3L1-201ENST00000305625 CADPSQ9ULU8 1353 aa12.79□□□□□ -0.36
MBD3L1-201ENST00000305625 CFTRP13569 1480 aa12.76□□□□□ -0.37
MBD3L1-201ENST00000305625 LAMC3Q9Y6N6 1575 aa12.69□□□□□ -0.38
MBD3L1-201ENST00000305625 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
MBD3L1-201ENST00000305625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
MBD3L1-201ENST00000305625 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
MBD3L1-201ENST00000305625 FANCD2Q9BXW9 1451 aa12.64□□□□□ -0.39
MBD3L1-201ENST00000305625 PDS5BQ9NTI5 1447 aa12.63□□□□□ -0.39
MBD3L1-201ENST00000305625 SAMD1Q6SPF0 538 aaPredicted RBP12.63□□□□□ -0.39
MBD3L1-201ENST00000305625 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
MBD3L1-201ENST00000305625 PRDM2Q13029 1718 aa12.59□□□□□ -0.39
MBD3L1-201ENST00000305625 KIF21AQ7Z4S6 1674 aa12.59□□□□□ -0.39
MBD3L1-201ENST00000305625 ABCC8Q09428 1581 aa12.58□□□□□ -0.4
MBD3L1-201ENST00000305625 ERCC6Q03468 1493 aa12.58□□□□□ -0.4
MBD3L1-201ENST00000305625 CEP164Q9UPV0 1460 aa12.57□□□□□ -0.4
MBD3L1-201ENST00000305625 ATF5Q9Y2D1 282 aaPredicted RBP12.55□□□□□ -0.4
MBD3L1-201ENST00000305625 EEA1Q15075 1411 aa12.54□□□□□ -0.4
MBD3L1-201ENST00000305625 WRNQ14191 1432 aaPredicted RBP eCLIP12.52□□□□□ -0.41
MBD3L1-201ENST00000305625 CUX1P39880 1505 aa12.51□□□□□ -0.41
MBD3L1-201ENST00000305625 URB2Q14146 1524 aaKnown RBP12.51□□□□□ -0.41
MBD3L1-201ENST00000305625 FKBP8Q14318 412 aa12.5□□□□□ -0.41
MBD3L1-201ENST00000305625 MRC2Q9UBG0 1479 aa12.49□□□□□ -0.41
MBD3L1-201ENST00000305625 SYNJ1O43426 1573 aa12.48□□□□□ -0.41
MBD3L1-201ENST00000305625 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
MBD3L1-201ENST00000305625 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
MBD3L1-201ENST00000305625 THOC2Q8NI27 1593 aaKnown RBP12.46□□□□□ -0.42
MBD3L1-201ENST00000305625 DNMBPQ6XZF7 1577 aa12.44□□□□□ -0.42
MBD3L1-201ENST00000305625 TOP2BQ02880 1626 aa12.43□□□□□ -0.42
MBD3L1-201ENST00000305625 WDR62O43379 1518 aa12.42□□□□□ -0.42
MBD3L1-201ENST00000305625 APLP2Q06481 763 aa12.42□□□□□ -0.42
MBD3L1-201ENST00000305625 LOC105371045A0A1W2PR82 267 aa12.41□□□□□ -0.42
MBD3L1-201ENST00000305625 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.42
MBD3L1-201ENST00000305625 FGD5Q6ZNL6 1462 aa12.4□□□□□ -0.42
MBD3L1-201ENST00000305625 POLA1P09884 1462 aaPredicted RBP12.39□□□□□ -0.43
MBD3L1-201ENST00000305625 RAD54L2Q9Y4B4 1467 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms