RNA–Protein interactions for RNA: ENST00000410290.1

RNU2-17P-201, Transcript of RNA, U2 small nuclear 17, pseudogene, humanhuman

BASIC

Gene RNU2-17P, Length 190 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-17P-201ENST00000410290 CHIC1Q5VXU3 224 aa20.48■□□□□ 0.87
RNU2-17P-201ENST00000410290 AEBP2Q6ZN18 517 aaPredicted RBP20.42■□□□□ 0.86
RNU2-17P-201ENST00000410290 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
RNU2-17P-201ENST00000410290 SENP3Q9H4L4 574 aaPredicted RBP17.16■□□□□ 0.34
RNU2-17P-201ENST00000410290 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
RNU2-17P-201ENST00000410290 FOXD1Q16676 465 aa15.91■□□□□ 0.14
RNU2-17P-201ENST00000410290 ADRA2BP18089 450 aa15.84■□□□□ 0.13
RNU2-17P-201ENST00000410290 PPP6R1Q9UPN7 881 aa15.79■□□□□ 0.12
RNU2-17P-201ENST00000410290 KCNA4P22459 653 aa15.31■□□□□ 0.04
RNU2-17P-201ENST00000410290 PIAS4Q8N2W9 510 aaPredicted RBP15.11■□□□□ 0.01
RNU2-17P-201ENST00000410290 PPP4R3CPQ6ZMV5 832 aa14.96□□□□□ -0.01
RNU2-17P-201ENST00000410290 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
RNU2-17P-201ENST00000410290 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
RNU2-17P-201ENST00000410290 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
RNU2-17P-201ENST00000410290 NPM3O75607 178 aaKnown RBP14.54□□□□□ -0.08
RNU2-17P-201ENST00000410290 CSRNP3Q8WYN3 585 aa14.52□□□□□ -0.09
RNU2-17P-201ENST00000410290 CNKSR2Q8WXI2 1034 aa14.38□□□□□ -0.11
RNU2-17P-201ENST00000410290 SCAF1Q9H7N4 1312 aaKnown RBP14.37□□□□□ -0.11
RNU2-17P-201ENST00000410290 MSH5O43196 834 aa14.36□□□□□ -0.11
RNU2-17P-201ENST00000410290 MAPK8IP2Q13387 824 aaPredicted RBP14.16□□□□□ -0.14
RNU2-17P-201ENST00000410290 ZBTB22O15209 634 aa14.13□□□□□ -0.15
RNU2-17P-201ENST00000410290 DNAJC5BQ9UF47 199 aa14.02□□□□□ -0.17
RNU2-17P-201ENST00000410290 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.17
RNU2-17P-201ENST00000410290 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
RNU2-17P-201ENST00000410290 DMRT2Q9Y5R5 561 aa13.82□□□□□ -0.2
RNU2-17P-201ENST00000410290 HOXD11P31277 338 aaPredicted RBP13.77□□□□□ -0.21
RNU2-17P-201ENST00000410290 SLC4A2P04920 1241 aa13.61□□□□□ -0.23
RNU2-17P-201ENST00000410290 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
RNU2-17P-201ENST00000410290 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
RNU2-17P-201ENST00000410290 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
RNU2-17P-201ENST00000410290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.08□□□□□ -0.32
RNU2-17P-201ENST00000410290 FKBP8Q14318 412 aa13.05□□□□□ -0.32
RNU2-17P-201ENST00000410290 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
RNU2-17P-201ENST00000410290 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
RNU2-17P-201ENST00000410290 RTN4Q9NQC3 1192 aaKnown RBP12.97□□□□□ -0.33
RNU2-17P-201ENST00000410290 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.33
RNU2-17P-201ENST00000410290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.95□□□□□ -0.34
RNU2-17P-201ENST00000410290 HNRNPUL2Q1KMD3 747 aaKnown RBP12.95□□□□□ -0.34
RNU2-17P-201ENST00000410290 AMER1Q5JTC6 1135 aaPredicted RBP12.91□□□□□ -0.34
RNU2-17P-201ENST00000410290 ZNF219Q9P2Y4 722 aaPredicted RBP12.72□□□□□ -0.37
RNU2-17P-201ENST00000410290 SLC24A1O60721 1099 aa12.65□□□□□ -0.38
RNU2-17P-201ENST00000410290 APLP2Q06481 763 aa12.65□□□□□ -0.38
RNU2-17P-201ENST00000410290 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
RNU2-17P-201ENST00000410290 SPDYE4A6NLX3 237 aa12.46□□□□□ -0.41
RNU2-17P-201ENST00000410290 SPINK5Q9NQ38 1064 aaPredicted RBP12.46□□□□□ -0.41
RNU2-17P-201ENST00000410290 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
RNU2-17P-201ENST00000410290 RNF39Q9H2S5 420 aa12.41□□□□□ -0.42
RNU2-17P-201ENST00000410290 PROM2Q8N271 834 aa12.38□□□□□ -0.43
RNU2-17P-201ENST00000410290 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
RNU2-17P-201ENST00000410290 FBLN2P98095 1184 aa12.37□□□□□ -0.43
RNU2-17P-201ENST00000410290 POLA2Q14181 598 aa12.37□□□□□ -0.43
RNU2-17P-201ENST00000410290 CAPN15O75808 1086 aa12.32□□□□□ -0.44
RNU2-17P-201ENST00000410290 C1QBPQ07021 282 aaKnown RBP12.27□□□□□ -0.45
RNU2-17P-201ENST00000410290 VASPP50552 380 aaPredicted RBP12.24□□□□□ -0.45
RNU2-17P-201ENST00000410290 ABCB7O75027 752 aa12.17□□□□□ -0.46
RNU2-17P-201ENST00000410290 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
RNU2-17P-201ENST00000410290 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
RNU2-17P-201ENST00000410290 POTEDQ86YR6 584 aa12.09□□□□□ -0.47
RNU2-17P-201ENST00000410290 DSG3P32926 999 aa12.02□□□□□ -0.49
RNU2-17P-201ENST00000410290 PKD2Q13563 968 aa11.97□□□□□ -0.49
RNU2-17P-201ENST00000410290 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
RNU2-17P-201ENST00000410290 PLCB2Q00722 1185 aa11.94□□□□□ -0.5
RNU2-17P-201ENST00000410290 OSCARQ8IYS5 282 aa11.94□□□□□ -0.5
RNU2-17P-201ENST00000410290 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
RNU2-17P-201ENST00000410290 SPDYE2BA6NHP3 402 aa11.91□□□□□ -0.5
RNU2-17P-201ENST00000410290 SPDYE6P0CI01 402 aa11.91□□□□□ -0.5
RNU2-17P-201ENST00000410290 SPDYE2Q495Y8 402 aa11.91□□□□□ -0.5
RNU2-17P-201ENST00000410290 DCAF8L2P0C7V8 631 aa11.88□□□□□ -0.51
RNU2-17P-201ENST00000410290 SPOCK2Q92563 424 aa11.86□□□□□ -0.51
RNU2-17P-201ENST00000410290 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
RNU2-17P-201ENST00000410290 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
RNU2-17P-201ENST00000410290 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
RNU2-17P-201ENST00000410290 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
RNU2-17P-201ENST00000410290 HAP1P54257 671 aaPredicted RBP11.75□□□□□ -0.53
RNU2-17P-201ENST00000410290 ECM2O94769 699 aaPredicted RBP11.74□□□□□ -0.53
RNU2-17P-201ENST00000410290 MIER1Q8N108 512 aa11.73□□□□□ -0.53
RNU2-17P-201ENST00000410290 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
RNU2-17P-201ENST00000410290 RGL2O15211 777 aa11.65□□□□□ -0.54
RNU2-17P-201ENST00000410290 BBXQ8WY36 941 aaPredicted RBP11.64□□□□□ -0.55
RNU2-17P-201ENST00000410290 CACNB1Q02641 598 aaPredicted RBP11.62□□□□□ -0.55
RNU2-17P-201ENST00000410290 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
RNU2-17P-201ENST00000410290 VSIG10Q8N0Z9 540 aa11.59□□□□□ -0.55
RNU2-17P-201ENST00000410290 ZBTB47Q9UFB7 747 aaPredicted RBP11.58□□□□□ -0.56
RNU2-17P-201ENST00000410290 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
RNU2-17P-201ENST00000410290 CIZ1Q9ULV3 898 aaPredicted RBP11.57□□□□□ -0.56
RNU2-17P-201ENST00000410290 PAXIP1Q6ZW49 1069 aaPredicted RBP11.55□□□□□ -0.56
RNU2-17P-201ENST00000410290 CFAP44Q96MT7 982 aa11.5□□□□□ -0.57
RNU2-17P-201ENST00000410290 KDM2AQ9Y2K7 1162 aa11.49□□□□□ -0.57
RNU2-17P-201ENST00000410290 BCANQ96GW7 911 aa11.48□□□□□ -0.57
RNU2-17P-201ENST00000410290 TRIM41Q8WV44 630 aa11.47□□□□□ -0.57
RNU2-17P-201ENST00000410290 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.57
RNU2-17P-201ENST00000410290 SPRYD3Q8NCJ5 442 aa11.44□□□□□ -0.58
RNU2-17P-201ENST00000410290 NUBP1P53384 320 aa11.42□□□□□ -0.58
RNU2-17P-201ENST00000410290 SPDYE1Q8NFV5 336 aaPredicted RBP11.41□□□□□ -0.58
RNU2-17P-201ENST00000410290 GSE1Q14687 1217 aa11.4□□□□□ -0.58
RNU2-17P-201ENST00000410290 RNF25Q96BH1 459 aaPredicted RBP11.4□□□□□ -0.58
RNU2-17P-201ENST00000410290 TSHZ2Q9NRE2 1034 aa11.4□□□□□ -0.58
RNU2-17P-201ENST00000410290 AKT1S1Q96B36 256 aa11.39□□□□□ -0.59
RNU2-17P-201ENST00000410290 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
RNU2-17P-201ENST00000410290 RBM42Q9BTD8 480 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms