RNA–Protein interactions for RNA: ENST00000394686.3

SGMS2-203, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 2,127 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-203ENST00000394686 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
SGMS2-203ENST00000394686 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
SGMS2-203ENST00000394686 PHF23Q9BUL5 403 aaPredicted RBP15.14■□□□□ 0.01
SGMS2-203ENST00000394686 EHMT2Q96KQ7 1210 aa14.27□□□□□ -0.13
SGMS2-203ENST00000394686 PLPPR3Q6T4P5 718 aa14.05□□□□□ -0.16
SGMS2-203ENST00000394686 KCNA4P22459 653 aa13.76□□□□□ -0.21
SGMS2-203ENST00000394686 ADRA2BP18089 450 aa13.53□□□□□ -0.24
SGMS2-203ENST00000394686 SLC24A1O60721 1099 aa13.49□□□□□ -0.25
SGMS2-203ENST00000394686 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
SGMS2-203ENST00000394686 SENP3Q9H4L4 574 aaPredicted RBP13.4□□□□□ -0.26
SGMS2-203ENST00000394686 SLC4A1APQ9BWU0 796 aaKnown RBP13.13□□□□□ -0.31
SGMS2-203ENST00000394686 PPP6R1Q9UPN7 881 aa13.09□□□□□ -0.31
SGMS2-203ENST00000394686 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
SGMS2-203ENST00000394686 ZBTB22O15209 634 aa12.78□□□□□ -0.36
SGMS2-203ENST00000394686 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
SGMS2-203ENST00000394686 AMER1Q5JTC6 1135 aaPredicted RBP12.69□□□□□ -0.38
SGMS2-203ENST00000394686 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
SGMS2-203ENST00000394686 FOXD1Q16676 465 aa12.55□□□□□ -0.4
SGMS2-203ENST00000394686 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
SGMS2-203ENST00000394686 NISCHQ9Y2I1 1504 aa12.46□□□□□ -0.42
SGMS2-203ENST00000394686 NCBP3Q53F19 620 aaKnown RBP12.37□□□□□ -0.43
SGMS2-203ENST00000394686 PRKCSHP14314 528 aaPredicted RBP12.11□□□□□ -0.47
SGMS2-203ENST00000394686 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
SGMS2-203ENST00000394686 FKBP8Q14318 412 aa12.1□□□□□ -0.47
SGMS2-203ENST00000394686 PIAS4Q8N2W9 510 aaPredicted RBP12.05□□□□□ -0.48
SGMS2-203ENST00000394686 CNKSR2Q8WXI2 1034 aa11.91□□□□□ -0.5
SGMS2-203ENST00000394686 PLCB2Q00722 1185 aa11.79□□□□□ -0.52
SGMS2-203ENST00000394686 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
SGMS2-203ENST00000394686 HAP1P54257 671 aaPredicted RBP11.69□□□□□ -0.54
SGMS2-203ENST00000394686 MAPK8IP2Q13387 824 aaPredicted RBP11.63□□□□□ -0.55
SGMS2-203ENST00000394686 BCANQ96GW7 911 aa11.63□□□□□ -0.55
SGMS2-203ENST00000394686 SLC4A2P04920 1241 aa11.6□□□□□ -0.55
SGMS2-203ENST00000394686 TPRNQ4KMQ1 711 aa11.6□□□□□ -0.55
SGMS2-203ENST00000394686 DNAJC5BQ9UF47 199 aa11.58□□□□□ -0.56
SGMS2-203ENST00000394686 SCAF1Q9H7N4 1312 aaKnown RBP11.51□□□□□ -0.57
SGMS2-203ENST00000394686 MSH5O43196 834 aa11.5□□□□□ -0.57
SGMS2-203ENST00000394686 TIMELESSQ9UNS1 1208 aa11.48□□□□□ -0.57
SGMS2-203ENST00000394686 DCAF8L2P0C7V8 631 aa11.45□□□□□ -0.58
SGMS2-203ENST00000394686 RNF216Q9NWF9 866 aaPredicted RBP11.41□□□□□ -0.58
SGMS2-203ENST00000394686 KDM2AQ9Y2K7 1162 aa11.41□□□□□ -0.58
SGMS2-203ENST00000394686 ATXN8OSP0DMR3 200 aa11.39□□□□□ -0.59
SGMS2-203ENST00000394686 FBLN2P98095 1184 aa11.38□□□□□ -0.59
SGMS2-203ENST00000394686 TULP1O00294 542 aaPredicted RBP11.36□□□□□ -0.59
SGMS2-203ENST00000394686 DAXXQ9UER7 740 aaPredicted RBP11.35□□□□□ -0.59
SGMS2-203ENST00000394686 MYCNP04198 464 aaPredicted RBP11.33□□□□□ -0.6
SGMS2-203ENST00000394686 ATF5Q9Y2D1 282 aaPredicted RBP11.33□□□□□ -0.6
SGMS2-203ENST00000394686 VSIG10Q8N0Z9 540 aa11.33□□□□□ -0.6
SGMS2-203ENST00000394686 CCDC180Q9P1Z9 1646 aa11.26□□□□□ -0.61
SGMS2-203ENST00000394686 PELP1Q8IZL8 1130 aaKnown RBP11.24□□□□□ -0.61
SGMS2-203ENST00000394686 PKD2Q13563 968 aa11.18□□□□□ -0.62
SGMS2-203ENST00000394686 IFNLR1Q8IU57 520 aaPredicted RBP11.14□□□□□ -0.63
SGMS2-203ENST00000394686 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
SGMS2-203ENST00000394686 ARXQ96QS3 562 aa11.11□□□□□ -0.63
SGMS2-203ENST00000394686 PAXIP1Q6ZW49 1069 aaPredicted RBP11.1□□□□□ -0.63
SGMS2-203ENST00000394686 GTF3C3Q9Y5Q9 886 aa11.1□□□□□ -0.63
SGMS2-203ENST00000394686 HOXD11P31277 338 aaPredicted RBP11.09□□□□□ -0.63
SGMS2-203ENST00000394686 CFAP44Q96MT7 982 aa11.09□□□□□ -0.63
SGMS2-203ENST00000394686 VASPP50552 380 aaPredicted RBP11.08□□□□□ -0.64
SGMS2-203ENST00000394686 TSHZ2Q9NRE2 1034 aa11.04□□□□□ -0.64
SGMS2-203ENST00000394686 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
SGMS2-203ENST00000394686 HRCP23327 699 aa11□□□□□ -0.65
SGMS2-203ENST00000394686 MYT1Q01538 1121 aa10.99□□□□□ -0.65
SGMS2-203ENST00000394686 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.96□□□□□ -0.66
SGMS2-203ENST00000394686 BBXQ8WY36 941 aaPredicted RBP10.94□□□□□ -0.66
SGMS2-203ENST00000394686 SPDYE4A6NLX3 237 aa10.94□□□□□ -0.66
SGMS2-203ENST00000394686 DMRT2Q9Y5R5 561 aa10.92□□□□□ -0.66
SGMS2-203ENST00000394686 TMEM132AQ24JP5 1023 aa10.87□□□□□ -0.67
SGMS2-203ENST00000394686 HOMEZQ8IX15 550 aa10.87□□□□□ -0.67
SGMS2-203ENST00000394686 ABCC9O60706 1549 aa10.83□□□□□ -0.68
SGMS2-203ENST00000394686 PROM2Q8N271 834 aa10.83□□□□□ -0.68
SGMS2-203ENST00000394686 NBR1Q14596 966 aa10.82□□□□□ -0.68
SGMS2-203ENST00000394686 RGL2O15211 777 aa10.81□□□□□ -0.68
SGMS2-203ENST00000394686 ECM2O94769 699 aaPredicted RBP10.81□□□□□ -0.68
SGMS2-203ENST00000394686 MKRN4PQ13434 485 aaPredicted RBP10.8□□□□□ -0.68
SGMS2-203ENST00000394686 SPRYD3Q8NCJ5 442 aa10.8□□□□□ -0.68
SGMS2-203ENST00000394686 C14orf37Q86TY3 774 aa10.78□□□□□ -0.68
SGMS2-203ENST00000394686 ZNF219Q9P2Y4 722 aaPredicted RBP10.75□□□□□ -0.69
SGMS2-203ENST00000394686 U3KPZ7 1027 aaPredicted RBP10.69□□□□□ -0.7
SGMS2-203ENST00000394686 SUPT5HO00267 1087 aaKnown RBP10.67□□□□□ -0.7
SGMS2-203ENST00000394686 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
SGMS2-203ENST00000394686 DNAJC5Q9H3Z4 198 aa10.66□□□□□ -0.7
SGMS2-203ENST00000394686 CHGAP10645 457 aaKnown RBP10.66□□□□□ -0.7
SGMS2-203ENST00000394686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.64□□□□□ -0.71
SGMS2-203ENST00000394686 KLHL34Q8N239 644 aa10.64□□□□□ -0.71
SGMS2-203ENST00000394686 PODXL2Q9NZ53 605 aa10.64□□□□□ -0.71
SGMS2-203ENST00000394686 SPOCK2Q92563 424 aa10.6□□□□□ -0.71
SGMS2-203ENST00000394686 DCAF8L1A6NGE4 600 aa10.59□□□□□ -0.71
SGMS2-203ENST00000394686 ERICH6Q7L0X2 663 aa10.59□□□□□ -0.71
SGMS2-203ENST00000394686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.55□□□□□ -0.72
SGMS2-203ENST00000394686 HNRNPUL2Q1KMD3 747 aaKnown RBP10.55□□□□□ -0.72
SGMS2-203ENST00000394686 RB1CC1Q8TDY2 1594 aa10.55□□□□□ -0.72
SGMS2-203ENST00000394686 NACADO15069 1562 aa10.52□□□□□ -0.73
SGMS2-203ENST00000394686 PCGF6Q9BYE7 350 aa10.48□□□□□ -0.73
SGMS2-203ENST00000394686 UBTFP17480 764 aaKnown RBP10.47□□□□□ -0.73
SGMS2-203ENST00000394686 PPARGC1BQ86YN6 1023 aaKnown RBP10.47□□□□□ -0.73
SGMS2-203ENST00000394686 MYO15BQ96JP2 1530 aa10.47□□□□□ -0.73
SGMS2-203ENST00000394686 DCAF1Q9Y4B6 1507 aa10.46□□□□□ -0.73
SGMS2-203ENST00000394686 TRHP20396 242 aaPredicted RBP10.46□□□□□ -0.74
SGMS2-203ENST00000394686 ZEB1P37275 1124 aaPredicted RBP10.44□□□□□ -0.74
SGMS2-203ENST00000394686 TTBK1Q5TCY1 1321 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms