RNA–Protein interactions for RNA: ENST00000296028.3

PPBP-201, Transcript of pro-platelet basic protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPBP, Length 715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPBP-201ENST00000296028 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
PPBP-201ENST00000296028 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
PPBP-201ENST00000296028 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
PPBP-201ENST00000296028 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
PPBP-201ENST00000296028 PLPPR3Q6T4P5 718 aa19.34■□□□□ 0.69
PPBP-201ENST00000296028 FOXD1Q16676 465 aa19.14■□□□□ 0.65
PPBP-201ENST00000296028 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
PPBP-201ENST00000296028 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
PPBP-201ENST00000296028 ADRA2BP18089 450 aa18.32■□□□□ 0.52
PPBP-201ENST00000296028 PIAS4Q8N2W9 510 aaPredicted RBP18.06■□□□□ 0.48
PPBP-201ENST00000296028 MSH5O43196 834 aa17.8■□□□□ 0.44
PPBP-201ENST00000296028 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
PPBP-201ENST00000296028 PPP4R3CPQ6ZMV5 832 aa16.97■□□□□ 0.31
PPBP-201ENST00000296028 NCBP3Q53F19 620 aaKnown RBP16.62■□□□□ 0.25
PPBP-201ENST00000296028 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
PPBP-201ENST00000296028 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
PPBP-201ENST00000296028 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
PPBP-201ENST00000296028 KCNA4P22459 653 aa16.51■□□□□ 0.23
PPBP-201ENST00000296028 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
PPBP-201ENST00000296028 NPM3O75607 178 aaKnown RBP16.26■□□□□ 0.19
PPBP-201ENST00000296028 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
PPBP-201ENST00000296028 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
PPBP-201ENST00000296028 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
PPBP-201ENST00000296028 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
PPBP-201ENST00000296028 EHMT2Q96KQ7 1210 aa15.63■□□□□ 0.09
PPBP-201ENST00000296028 CACNB1Q02641 598 aaPredicted RBP15.41■□□□□ 0.06
PPBP-201ENST00000296028 CSRNP3Q8WYN3 585 aa15.41■□□□□ 0.06
PPBP-201ENST00000296028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.36■□□□□ 0.05
PPBP-201ENST00000296028 SLC4A2P04920 1241 aa15.35■□□□□ 0.05
PPBP-201ENST00000296028 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
PPBP-201ENST00000296028 ZBTB22O15209 634 aa15.24■□□□□ 0.03
PPBP-201ENST00000296028 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
PPBP-201ENST00000296028 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
PPBP-201ENST00000296028 U3KPZ7 1027 aaPredicted RBP15.1■□□□□ 0.01
PPBP-201ENST00000296028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.07■□□□□ 0
PPBP-201ENST00000296028 C1QBPQ07021 282 aaKnown RBP15.07■□□□□ 0
PPBP-201ENST00000296028 HNRNPUL2Q1KMD3 747 aaKnown RBP15.07■□□□□ 0
PPBP-201ENST00000296028 SAMD1Q6SPF0 538 aaPredicted RBP14.97□□□□□ -0.01
PPBP-201ENST00000296028 APLP2Q06481 763 aa14.95□□□□□ -0.02
PPBP-201ENST00000296028 ATXN8OSP0DMR3 200 aa14.85□□□□□ -0.03
PPBP-201ENST00000296028 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
PPBP-201ENST00000296028 SPINK5Q9NQ38 1064 aaPredicted RBP14.62□□□□□ -0.07
PPBP-201ENST00000296028 CAPN15O75808 1086 aa14.61□□□□□ -0.07
PPBP-201ENST00000296028 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
PPBP-201ENST00000296028 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
PPBP-201ENST00000296028 DSG3P32926 999 aa14.42□□□□□ -0.1
PPBP-201ENST00000296028 POLA2Q14181 598 aa14.31□□□□□ -0.12
PPBP-201ENST00000296028 ABCB7O75027 752 aa14.26□□□□□ -0.13
PPBP-201ENST00000296028 POTEHQ6S545 545 aa14.23□□□□□ -0.13
PPBP-201ENST00000296028 ZBTB12Q9Y330 459 aaPredicted RBP14.23□□□□□ -0.13
PPBP-201ENST00000296028 FBLN2P98095 1184 aa14.09□□□□□ -0.15
PPBP-201ENST00000296028 MKRN4PQ13434 485 aaPredicted RBP13.96□□□□□ -0.17
PPBP-201ENST00000296028 RBM42Q9BTD8 480 aaKnown RBP13.85□□□□□ -0.19
PPBP-201ENST00000296028 FKBP8Q14318 412 aa13.83□□□□□ -0.2
PPBP-201ENST00000296028 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
PPBP-201ENST00000296028 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
PPBP-201ENST00000296028 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
PPBP-201ENST00000296028 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
PPBP-201ENST00000296028 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
PPBP-201ENST00000296028 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
PPBP-201ENST00000296028 SSUH2Q9Y2M2 353 aa13.66□□□□□ -0.22
PPBP-201ENST00000296028 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
PPBP-201ENST00000296028 PROM2Q8N271 834 aa13.53□□□□□ -0.24
PPBP-201ENST00000296028 PABPN1Q86U42 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
PPBP-201ENST00000296028 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
PPBP-201ENST00000296028 SPDYE1Q8NFV5 336 aaPredicted RBP13.39□□□□□ -0.27
PPBP-201ENST00000296028 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
PPBP-201ENST00000296028 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
PPBP-201ENST00000296028 PITPNM1O00562 1244 aa13.25□□□□□ -0.29
PPBP-201ENST00000296028 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
PPBP-201ENST00000296028 AMER1Q5JTC6 1135 aaPredicted RBP13.19□□□□□ -0.3
PPBP-201ENST00000296028 CLEC11AQ9Y240 323 aa13.19□□□□□ -0.3
PPBP-201ENST00000296028 CHRDL2Q6WN34 429 aa13.18□□□□□ -0.3
PPBP-201ENST00000296028 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
PPBP-201ENST00000296028 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
PPBP-201ENST00000296028 FXR2P51116 673 aaKnown RBP eCLIP13.08□□□□□ -0.32
PPBP-201ENST00000296028 PLEKHG5O94827 1062 aa13.01□□□□□ -0.33
PPBP-201ENST00000296028 PIP4P2Q8N4L2 257 aa12.98□□□□□ -0.33
PPBP-201ENST00000296028 SP7Q8TDD2 431 aaPredicted RBP12.97□□□□□ -0.33
PPBP-201ENST00000296028 IFNLR1Q8IU57 520 aaPredicted RBP12.96□□□□□ -0.33
PPBP-201ENST00000296028 MIER1Q8N108 512 aa12.96□□□□□ -0.33
PPBP-201ENST00000296028 CREBZFQ9NS37 354 aa12.96□□□□□ -0.33
PPBP-201ENST00000296028 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
PPBP-201ENST00000296028 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
PPBP-201ENST00000296028 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
PPBP-201ENST00000296028 NPM1P06748 294 aaKnown RBP eCLIP12.83□□□□□ -0.36
PPBP-201ENST00000296028 MNX1P50219 401 aaPredicted RBP12.83□□□□□ -0.36
PPBP-201ENST00000296028 CHADLQ6NUI6 762 aa12.83□□□□□ -0.36
PPBP-201ENST00000296028 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
PPBP-201ENST00000296028 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
PPBP-201ENST00000296028 SPOCK2Q92563 424 aa12.72□□□□□ -0.37
PPBP-201ENST00000296028 PKD2Q13563 968 aa12.67□□□□□ -0.38
PPBP-201ENST00000296028 NUBP1P53384 320 aa12.66□□□□□ -0.38
PPBP-201ENST00000296028 C19orf67A6NJJ6 358 aa12.62□□□□□ -0.39
PPBP-201ENST00000296028 PAK3O75914 559 aaPredicted RBP12.6□□□□□ -0.39
PPBP-201ENST00000296028 FAM212AQ96EL1 285 aa12.59□□□□□ -0.39
PPBP-201ENST00000296028 GSE1Q14687 1217 aa12.58□□□□□ -0.4
PPBP-201ENST00000296028 HAX1O00165 279 aa12.56□□□□□ -0.4
PPBP-201ENST00000296028 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
PPBP-201ENST00000296028 RASEFQ8IZ41 740 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms