RNA–Protein interactions for RNA: ENST00000616135.1

MMACHC-203, Transcript of methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria, humanhuman

TSL 2 BASIC

Gene MMACHC, Length 1,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMACHC-203ENST00000616135 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
MMACHC-203ENST00000616135 CHIC1Q5VXU3 224 aa19.34■□□□□ 0.69
MMACHC-203ENST00000616135 NISCHQ9Y2I1 1504 aa17.22■□□□□ 0.35
MMACHC-203ENST00000616135 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
MMACHC-203ENST00000616135 SENP3Q9H4L4 574 aaPredicted RBP16.95■□□□□ 0.3
MMACHC-203ENST00000616135 FOXD1Q16676 465 aa15.88■□□□□ 0.13
MMACHC-203ENST00000616135 PLPPR3Q6T4P5 718 aa15.84■□□□□ 0.13
MMACHC-203ENST00000616135 CCDC180Q9P1Z9 1646 aa15.09■□□□□ 0.01
MMACHC-203ENST00000616135 POTEDQ86YR6 584 aa15.04■□□□□ -0
MMACHC-203ENST00000616135 ADRA2BP18089 450 aa14.94□□□□□ -0.02
MMACHC-203ENST00000616135 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
MMACHC-203ENST00000616135 MSH5O43196 834 aa14.91□□□□□ -0.02
MMACHC-203ENST00000616135 ABCC9O60706 1549 aa14.71□□□□□ -0.05
MMACHC-203ENST00000616135 PIAS4Q8N2W9 510 aaPredicted RBP14.7□□□□□ -0.06
MMACHC-203ENST00000616135 DCAF8L2P0C7V8 631 aa14.47□□□□□ -0.09
MMACHC-203ENST00000616135 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
MMACHC-203ENST00000616135 NACADO15069 1562 aa14.19□□□□□ -0.14
MMACHC-203ENST00000616135 DCAF1Q9Y4B6 1507 aa14.19□□□□□ -0.14
MMACHC-203ENST00000616135 RB1CC1Q8TDY2 1594 aa14.15□□□□□ -0.14
MMACHC-203ENST00000616135 MYO15BQ96JP2 1530 aa14.15□□□□□ -0.14
MMACHC-203ENST00000616135 KCNA4P22459 653 aa14.01□□□□□ -0.17
MMACHC-203ENST00000616135 PPP4R3CPQ6ZMV5 832 aa13.99□□□□□ -0.17
MMACHC-203ENST00000616135 SCRIBQ14160 1630 aa13.91□□□□□ -0.18
MMACHC-203ENST00000616135 SHROOM4Q9ULL8 1493 aa13.88□□□□□ -0.19
MMACHC-203ENST00000616135 PABPN1Q86U42 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
MMACHC-203ENST00000616135 UNC13AQ9UPW8 1703 aa13.82□□□□□ -0.2
MMACHC-203ENST00000616135 BICRAQ9NZM4 1560 aa13.75□□□□□ -0.21
MMACHC-203ENST00000616135 NCBP3Q53F19 620 aaKnown RBP13.72□□□□□ -0.21
MMACHC-203ENST00000616135 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
MMACHC-203ENST00000616135 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
MMACHC-203ENST00000616135 NPM3O75607 178 aaKnown RBP13.51□□□□□ -0.25
MMACHC-203ENST00000616135 MAPK8IP2Q13387 824 aaPredicted RBP13.46□□□□□ -0.25
MMACHC-203ENST00000616135 CECR2Q9BXF3 1484 aa13.45□□□□□ -0.26
MMACHC-203ENST00000616135 DMRT2Q9Y5R5 561 aa13.44□□□□□ -0.26
MMACHC-203ENST00000616135 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
MMACHC-203ENST00000616135 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
MMACHC-203ENST00000616135 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
MMACHC-203ENST00000616135 EIF4G1Q04637 1599 aaKnown RBP13.37□□□□□ -0.27
MMACHC-203ENST00000616135 MROH2BQ7Z745 1585 aa13.31□□□□□ -0.28
MMACHC-203ENST00000616135 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
MMACHC-203ENST00000616135 SMARCA4P51532 1647 aa13.28□□□□□ -0.28
MMACHC-203ENST00000616135 CC2D2AQ9P2K1 1620 aa13.26□□□□□ -0.29
MMACHC-203ENST00000616135 RSF1Q96T23 1441 aaPredicted RBP13.25□□□□□ -0.29
MMACHC-203ENST00000616135 SUPT5HO00267 1087 aaKnown RBP13.21□□□□□ -0.29
MMACHC-203ENST00000616135 ATAD2BQ9ULI0 1458 aa13.2□□□□□ -0.3
MMACHC-203ENST00000616135 RNF216Q9NWF9 866 aaPredicted RBP13.19□□□□□ -0.3
MMACHC-203ENST00000616135 WIZO95785 1651 aa13.16□□□□□ -0.3
MMACHC-203ENST00000616135 NCAPD3P42695 1498 aa13.14□□□□□ -0.31
MMACHC-203ENST00000616135 SMARCA2P51531 1590 aa13.14□□□□□ -0.31
MMACHC-203ENST00000616135 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
MMACHC-203ENST00000616135 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
MMACHC-203ENST00000616135 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
MMACHC-203ENST00000616135 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
MMACHC-203ENST00000616135 HMGXB3Q12766 1538 aa13.04□□□□□ -0.32
MMACHC-203ENST00000616135 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
MMACHC-203ENST00000616135 CACNB1Q02641 598 aaPredicted RBP12.92□□□□□ -0.34
MMACHC-203ENST00000616135 CCDC88BA6NC98 1476 aa12.91□□□□□ -0.34
MMACHC-203ENST00000616135 ZBTB22O15209 634 aa12.89□□□□□ -0.35
MMACHC-203ENST00000616135 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
MMACHC-203ENST00000616135 NESP48681 1621 aa12.8□□□□□ -0.36
MMACHC-203ENST00000616135 CADPSQ9ULU8 1353 aa12.8□□□□□ -0.36
MMACHC-203ENST00000616135 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
MMACHC-203ENST00000616135 RNF39Q9H2S5 420 aa12.74□□□□□ -0.37
MMACHC-203ENST00000616135 CFTRP13569 1480 aa12.74□□□□□ -0.37
MMACHC-203ENST00000616135 LAMC3Q9Y6N6 1575 aa12.7□□□□□ -0.38
MMACHC-203ENST00000616135 SLC4A2P04920 1241 aa12.67□□□□□ -0.38
MMACHC-203ENST00000616135 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
MMACHC-203ENST00000616135 ERCC6Q03468 1493 aa12.63□□□□□ -0.39
MMACHC-203ENST00000616135 FANCD2Q9BXW9 1451 aa12.63□□□□□ -0.39
MMACHC-203ENST00000616135 KIF21AQ7Z4S6 1674 aa12.58□□□□□ -0.4
MMACHC-203ENST00000616135 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
MMACHC-203ENST00000616135 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
MMACHC-203ENST00000616135 MRC2Q9UBG0 1479 aa12.51□□□□□ -0.41
MMACHC-203ENST00000616135 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
MMACHC-203ENST00000616135 ABCC8Q09428 1581 aa12.51□□□□□ -0.41
MMACHC-203ENST00000616135 URB2Q14146 1524 aaKnown RBP12.5□□□□□ -0.41
MMACHC-203ENST00000616135 MYCNP04198 464 aaPredicted RBP12.49□□□□□ -0.41
MMACHC-203ENST00000616135 WRNQ14191 1432 aaPredicted RBP eCLIP12.47□□□□□ -0.41
MMACHC-203ENST00000616135 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
MMACHC-203ENST00000616135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.46□□□□□ -0.42
MMACHC-203ENST00000616135 CUX1P39880 1505 aa12.46□□□□□ -0.42
MMACHC-203ENST00000616135 TOPBP1Q92547 1522 aa12.46□□□□□ -0.42
MMACHC-203ENST00000616135 WDR62O43379 1518 aa12.44□□□□□ -0.42
MMACHC-203ENST00000616135 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
MMACHC-203ENST00000616135 TRIM41Q8WV44 630 aa12.42□□□□□ -0.42
MMACHC-203ENST00000616135 SYNJ1O43426 1573 aa12.41□□□□□ -0.42
MMACHC-203ENST00000616135 FGD5Q6ZNL6 1462 aa12.37□□□□□ -0.43
MMACHC-203ENST00000616135 TOP2BQ02880 1626 aa12.37□□□□□ -0.43
MMACHC-203ENST00000616135 POLA1P09884 1462 aaPredicted RBP12.37□□□□□ -0.43
MMACHC-203ENST00000616135 RAD54L2Q9Y4B4 1467 aa12.37□□□□□ -0.43
MMACHC-203ENST00000616135 CUX2O14529 1486 aa12.36□□□□□ -0.43
MMACHC-203ENST00000616135 SOGA1O94964 1423 aa12.36□□□□□ -0.43
MMACHC-203ENST00000616135 BIVM-ERCC5R4GMW8 1640 aa12.34□□□□□ -0.43
MMACHC-203ENST00000616135 ATXN8OSP0DMR3 200 aa12.33□□□□□ -0.44
MMACHC-203ENST00000616135 IFT140Q96RY7 1462 aa12.31□□□□□ -0.44
MMACHC-203ENST00000616135 TDRD9Q8NDG6 1382 aaKnown RBP12.3□□□□□ -0.44
MMACHC-203ENST00000616135 U3KPZ7 1027 aaPredicted RBP12.29□□□□□ -0.44
MMACHC-203ENST00000616135 ZNF608Q9ULD9 1512 aaPredicted RBP12.28□□□□□ -0.44
MMACHC-203ENST00000616135 TARBP1Q13395 1621 aaKnown RBP12.27□□□□□ -0.44
MMACHC-203ENST00000616135 AQRO60306 1485 aaKnown RBP eCLIP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms