Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC011416.1-201ENST00000514947 1732 ntBASIC5.07□□□□□ -1.6
VPS13CQ709C8 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 HMGB1P32-201ENST00000425971 565 ntBASIC5.07□□□□□ -1.6
VPS13CQ709C8 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 RANP2-201ENST00000456833 229 ntBASIC5.07□□□□□ -1.6
VPS13CQ709C8 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 AC090958.1-201ENST00000511122 351 ntBASIC5.07□□□□□ -1.6
VPS13CQ709C8 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 AL953862.2-201ENST00000603089 820 ntBASIC5.07□□□□□ -1.6
VPS13CQ709C8 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 AC005393.1-201ENST00000617916 584 ntBASIC5.07□□□□□ -1.6
VPS13CQ709C8 CASC19-264ENST00000641912 1184 ntBASIC5.07□□□□□ -1.6
VPS13CQ709C8 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 PAQR8-201ENST00000360726 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS13CQ709C8 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13CQ709C8 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 GRIA1-209ENST00000518783 5233 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 AC010624.4-201ENST00000597606 1351 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 AL353796.1-201ENST00000561542 3241 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 OR11H13P-201ENST00000359695 979 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 AC079841.1-201ENST00000481228 950 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 Y_RNA.710-201ENST00000516975 110 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 AC009120.3-201ENST00000563335 499 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 AL137067.2-201ENST00000621202 131 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 AL035555.1-201ENST00000404462 1790 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 ARHGEF9-228ENST00000636926 5436 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 CLIP1-201ENST00000302528 5833 ntAPPRIS P4 TSL 5 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 CNOT7P2-201ENST00000441051 832 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 AC008957.3-201ENST00000624112 2242 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 RNA5SP132-201ENST00000364725 118 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 CYP4F30P-202ENST00000420048 405 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 PPIAP10-201ENST00000438675 458 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 SIAH1P1-201ENST00000479411 923 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 FKBP1AP1-201ENST00000594588 318 ntBASIC5.06□□□□□ -1.6
VPS13CQ709C8 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS13CQ709C8 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13CQ709C8 NEPNP-201ENST00000404786 1371 ntBASIC5.05□□□□□ -1.6
VPS13CQ709C8 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS13CQ709C8 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS13CQ709C8 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS13CQ709C8 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS13CQ709C8 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS13CQ709C8 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS13CQ709C8 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS13CQ709C8 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS13CQ709C8 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS13CQ709C8 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS13CQ709C8 AC098847.1-201ENST00000473094 348 ntBASIC5.05□□□□□ -1.6
VPS13CQ709C8 SNORA70.20-201ENST00000516848 126 ntBASIC5.05□□□□□ -1.6
VPS13CQ709C8 AP001858.2-201ENST00000536213 601 ntBASIC5.05□□□□□ -1.6
VPS13CQ709C8 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS13CQ709C8 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms