RNA–Protein interactions for RNA: ENST00000518783.1

GRIA1-209, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 2 BASIC

Gene GRIA1, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-209ENST00000518783 NISCHQ9Y2I1 1504 aa19.91■□□□□ 0.78
GRIA1-209ENST00000518783 DCAF8L2P0C7V8 631 aa19.42■□□□□ 0.7
GRIA1-209ENST00000518783 PELP1Q8IZL8 1130 aaKnown RBP18.23■□□□□ 0.51
GRIA1-209ENST00000518783 MYT1Q01538 1121 aa18.07■□□□□ 0.48
GRIA1-209ENST00000518783 SHROOM4Q9ULL8 1493 aa17.76■□□□□ 0.43
GRIA1-209ENST00000518783 SUPT5HO00267 1087 aaKnown RBP17.62■□□□□ 0.41
GRIA1-209ENST00000518783 ABCC9O60706 1549 aa17.56■□□□□ 0.4
GRIA1-209ENST00000518783 ZEB1P37275 1124 aaPredicted RBP17.23■□□□□ 0.35
GRIA1-209ENST00000518783 HRCP23327 699 aa17.22■□□□□ 0.35
GRIA1-209ENST00000518783 PCGF6Q9BYE7 350 aa17.14■□□□□ 0.34
GRIA1-209ENST00000518783 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
GRIA1-209ENST00000518783 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
GRIA1-209ENST00000518783 FAM9AQ8IZU1 332 aaPredicted RBP17.01■□□□□ 0.31
GRIA1-209ENST00000518783 CCDC180Q9P1Z9 1646 aa16.89■□□□□ 0.29
GRIA1-209ENST00000518783 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
GRIA1-209ENST00000518783 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
GRIA1-209ENST00000518783 TRIM26Q12899 539 aaPredicted RBP16.6■□□□□ 0.25
GRIA1-209ENST00000518783 RB1CC1Q8TDY2 1594 aa16.58■□□□□ 0.25
GRIA1-209ENST00000518783 APLP2Q06481 763 aa16.58■□□□□ 0.24
GRIA1-209ENST00000518783 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
GRIA1-209ENST00000518783 CCER1Q8TC90 406 aaPredicted RBP16.52■□□□□ 0.23
GRIA1-209ENST00000518783 ERICH6Q7L0X2 663 aa16.51■□□□□ 0.23
GRIA1-209ENST00000518783 PPARGC1BQ86YN6 1023 aaKnown RBP16.48■□□□□ 0.23
GRIA1-209ENST00000518783 SCRIBQ14160 1630 aa16.44■□□□□ 0.22
GRIA1-209ENST00000518783 ZCCHC6Q5VYS8 1495 aaKnown RBP16.43■□□□□ 0.22
GRIA1-209ENST00000518783 NACADO15069 1562 aa16.42■□□□□ 0.22
GRIA1-209ENST00000518783 RANGAP1P46060 587 aaPredicted RBP16.33■□□□□ 0.2
GRIA1-209ENST00000518783 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
GRIA1-209ENST00000518783 UBTFP17480 764 aaKnown RBP16.29■□□□□ 0.2
GRIA1-209ENST00000518783 YTHDC1Q96MU7 727 aaKnown RBP16.21■□□□□ 0.19
GRIA1-209ENST00000518783 ACIN1Q9UKV3 1341 aaKnown RBP16.21■□□□□ 0.18
GRIA1-209ENST00000518783 GTF3C3Q9Y5Q9 886 aa16.2■□□□□ 0.18
GRIA1-209ENST00000518783 NEFLP07196 543 aa16.18■□□□□ 0.18
GRIA1-209ENST00000518783 CHIC1Q5VXU3 224 aa16.15■□□□□ 0.18
GRIA1-209ENST00000518783 DIEXFQ68CQ4 756 aaKnown RBP16.1■□□□□ 0.17
GRIA1-209ENST00000518783 FBLN2P98095 1184 aa16.08■□□□□ 0.16
GRIA1-209ENST00000518783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
GRIA1-209ENST00000518783 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.16
GRIA1-209ENST00000518783 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
GRIA1-209ENST00000518783 DCAF1Q9Y4B6 1507 aa16■□□□□ 0.15
GRIA1-209ENST00000518783 CLSPNQ9HAW4 1339 aa15.96■□□□□ 0.15
GRIA1-209ENST00000518783 MYT1LQ9UL68 1186 aa15.95■□□□□ 0.14
GRIA1-209ENST00000518783 LOC105371045A0A1W2PR82 267 aa15.86■□□□□ 0.13
GRIA1-209ENST00000518783 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
GRIA1-209ENST00000518783 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
GRIA1-209ENST00000518783 ERCC6Q03468 1493 aa15.8■□□□□ 0.12
GRIA1-209ENST00000518783 NEUROD1Q13562 356 aa15.76■□□□□ 0.11
GRIA1-209ENST00000518783 NPM1P06748 294 aaKnown RBP eCLIP15.7■□□□□ 0.1
GRIA1-209ENST00000518783 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
GRIA1-209ENST00000518783 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
GRIA1-209ENST00000518783 RTL5Q5HYW3 569 aaPredicted RBP15.7■□□□□ 0.1
GRIA1-209ENST00000518783 CHMP7Q8WUX9 453 aaPredicted RBP15.65■□□□□ 0.1
GRIA1-209ENST00000518783 CECR2Q9BXF3 1484 aa15.63■□□□□ 0.09
GRIA1-209ENST00000518783 ANP32EQ9BTT0 268 aa15.61■□□□□ 0.09
GRIA1-209ENST00000518783 RSF1Q96T23 1441 aaPredicted RBP15.58■□□□□ 0.09
GRIA1-209ENST00000518783 SMARCA2P51531 1590 aa15.56■□□□□ 0.08
GRIA1-209ENST00000518783 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
GRIA1-209ENST00000518783 PDS5BQ9NTI5 1447 aa15.52■□□□□ 0.08
GRIA1-209ENST00000518783 BCL11AQ9H165 835 aa15.52■□□□□ 0.07
GRIA1-209ENST00000518783 CDK11AQ9UQ88 783 aaPredicted RBP15.51■□□□□ 0.07
GRIA1-209ENST00000518783 DAXXQ9UER7 740 aaPredicted RBP15.46■□□□□ 0.07
GRIA1-209ENST00000518783 ITGAEP38570 1179 aa15.44■□□□□ 0.06
GRIA1-209ENST00000518783 P3H3Q8IVL6 736 aa15.43■□□□□ 0.06
GRIA1-209ENST00000518783 BCANQ96GW7 911 aa15.38■□□□□ 0.05
GRIA1-209ENST00000518783 ARID3CA6NKF2 412 aa15.37■□□□□ 0.05
GRIA1-209ENST00000518783 ESF1Q9H501 851 aaKnown RBP15.33■□□□□ 0.04
GRIA1-209ENST00000518783 ATAD2BQ9ULI0 1458 aa15.32■□□□□ 0.04
GRIA1-209ENST00000518783 CADPSQ9ULU8 1353 aa15.31■□□□□ 0.04
GRIA1-209ENST00000518783 GLIPR1L2Q4G1C9 344 aa15.31■□□□□ 0.04
GRIA1-209ENST00000518783 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
GRIA1-209ENST00000518783 MROH2BQ7Z745 1585 aa15.31■□□□□ 0.04
GRIA1-209ENST00000518783 FAM50AQ14320 339 aaKnown RBP15.3■□□□□ 0.04
GRIA1-209ENST00000518783 KIF27Q86VH2 1401 aa15.24■□□□□ 0.03
GRIA1-209ENST00000518783 ANP32AP39687 249 aaKnown RBP15.22■□□□□ 0.03
GRIA1-209ENST00000518783 ZNF777Q9ULD5 760 aaPredicted RBP15.22■□□□□ 0.03
GRIA1-209ENST00000518783 FKBP8Q14318 412 aa15.22■□□□□ 0.03
GRIA1-209ENST00000518783 EIF4G1Q04637 1599 aaKnown RBP15.21■□□□□ 0.03
GRIA1-209ENST00000518783 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
GRIA1-209ENST00000518783 ANP32CO43423 234 aa15.19■□□□□ 0.02
GRIA1-209ENST00000518783 CEP164Q9UPV0 1460 aa15.17■□□□□ 0.02
GRIA1-209ENST00000518783 SMARCA4P51532 1647 aa15.17■□□□□ 0.02
GRIA1-209ENST00000518783 MIER1Q8N108 512 aa15.16■□□□□ 0.02
GRIA1-209ENST00000518783 TRIM52Q96A61 297 aa15.15■□□□□ 0.02
GRIA1-209ENST00000518783 NCAPD3P42695 1498 aa15.15■□□□□ 0.02
GRIA1-209ENST00000518783 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.02
GRIA1-209ENST00000518783 EIF5BO60841 1220 aaKnown RBP15.13■□□□□ 0.01
GRIA1-209ENST00000518783 EEA1Q15075 1411 aa15.13■□□□□ 0.01
GRIA1-209ENST00000518783 SOGA1O94964 1423 aa15.12■□□□□ 0.01
GRIA1-209ENST00000518783 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
GRIA1-209ENST00000518783 PLEKHD1A6NEE1 506 aa15.11■□□□□ 0.01
GRIA1-209ENST00000518783 KCNH8Q96L42 1107 aa15.1■□□□□ 0.01
GRIA1-209ENST00000518783 CUX2O14529 1486 aa15.09■□□□□ 0.01
GRIA1-209ENST00000518783 SUPT16HQ9Y5B9 1047 aaKnown RBP15.08■□□□□ 0.01
GRIA1-209ENST00000518783 ABCC8Q09428 1581 aa15.07■□□□□ 0
GRIA1-209ENST00000518783 OSCARQ8IYS5 282 aa15.06■□□□□ 0
GRIA1-209ENST00000518783 FANCD2Q9BXW9 1451 aa15.06■□□□□ 0
GRIA1-209ENST00000518783 TDRD9Q8NDG6 1382 aaKnown RBP15.06■□□□□ 0
GRIA1-209ENST00000518783 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
GRIA1-209ENST00000518783 CC2D2AQ9P2K1 1620 aa15.05■□□□□ -0
GRIA1-209ENST00000518783 PLPPR3Q6T4P5 718 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms