Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC133644.2-201ENST00000608142 540 ntBASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC10.04□□□□□ -0.8
RIMBP3Q9UFD9 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 FTO-215ENST00000636491 1676 ntTSL 5 BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 ZNF469-202ENST00000565624 13279 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 AC025470.1-201ENST00000510053 2032 ntBASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 RN7SL544P-201ENST00000617232 284 ntBASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 RN7SL763P-201ENST00000620922 284 ntBASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 METTL15-211ENST00000634762 718 ntTSL 5 BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 CASC19-264ENST00000641912 1184 ntBASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 AC127459.1-201ENST00000563129 2768 ntBASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RIMBP3Q9UFD9 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC10.02□□□□□ -0.8
RIMBP3Q9UFD9 PDE11A-201ENST00000286063 9275 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
RIMBP3Q9UFD9 NFKB1-212ENST00000600343 4010 ntTSL 2 BASIC10.02□□□□□ -0.8
RIMBP3Q9UFD9 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC10.02□□□□□ -0.8
RIMBP3Q9UFD9 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 AC022325.1-201ENST00000502748 2199 ntBASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 RN7SKP213-201ENST00000410746 298 ntBASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 METTL15P3-201ENST00000415522 1221 ntBASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 AL662874.1-201ENST00000426065 230 ntBASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 AC096922.1-201ENST00000461635 651 ntBASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 MINCR-206ENST00000524335 499 ntTSL 2 BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 AL359513.1-201ENST00000614364 557 ntBASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 AC009704.2-201ENST00000618739 483 ntBASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 SLC24A4-205ENST00000532405 9950 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
RIMBP3Q9UFD9 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 AC245505.2-201ENST00000553572 3055 ntBASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 MAST4-203ENST00000403666 7586 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 RPS26P13-201ENST00000419030 330 ntBASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 AL390119.1-201ENST00000440329 312 ntBASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 AC009237.1-201ENST00000442127 744 ntBASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 RPS23P9-201ENST00000448848 438 ntBASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 AC134698.5-201ENST00000519444 336 ntBASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 WBP1LP3-201ENST00000523033 208 ntBASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 CDY7P-201ENST00000429883 1604 ntBASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 ACAN-201ENST00000352105 7526 ntTSL 5 BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
RIMBP3Q9UFD9 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC10□□□□□ -0.81
RIMBP3Q9UFD9 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms