Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SLCO4A1-209ENST00000497919 440 ntTSL 210.5□□□□□ -0.732e-10■□□□□ 9.6
PRPF8Q6P2Q9 SLCO4A1-204ENST00000466818 556 ntTSL 37.53□□□□□ -1.22e-10■□□□□ 9.6
PRPF8Q6P2Q9 DIP2A-209ENST00000479654 2911 ntTSL 1 (best)9.65□□□□□ -0.865e-6■□□□□ 9.6
PRPF8Q6P2Q9 DIP2A-208ENST00000478105 3234 ntTSL 28.61□□□□□ -1.031e-7■□□□□ 9.6
PRPF8Q6P2Q9 QPCTL-204ENST00000592769 365 ntTSL 58.57□□□□□ -1.045e-6■□□□□ 9.6
PRPF8Q6P2Q9 RAB11FIP3-208ENST00000464263 329 ntTSL 312.94□□□□□ -0.341e-6■□□□□ 9.6
PRPF8Q6P2Q9 PACSIN3-210ENST00000533686 443 ntTSL 313.65□□□□□ -0.224e-7■□□□□ 9.6
PRPF8Q6P2Q9 RING1-202ENST00000478431 1532 ntTSL 1 (best)20.18■□□□□ 0.822e-10■□□□□ 9.6
PRPF8Q6P2Q9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.562e-10■□□□□ 9.6
PRPF8Q6P2Q9 SREBF2-205ENST00000463741 634 ntTSL 213.29□□□□□ -0.286e-25■□□□□ 9.6
PRPF8Q6P2Q9 CABLES1-208ENST00000582882 604 ntTSL 216.78■□□□□ 0.283e-7■□□□□ 9.6
PRPF8Q6P2Q9 CABLES1-206ENST00000580153 343 ntTSL 510.41□□□□□ -0.743e-7■□□□□ 9.6
PRPF8Q6P2Q9 SHF-204ENST00000558685 597 ntTSL 410□□□□□ -0.815e-11■□□□□ 9.6
PRPF8Q6P2Q9 CABLES1-207ENST00000580644 413 ntTSL 59.53□□□□□ -0.883e-7■□□□□ 9.6
PRPF8Q6P2Q9 EIF4G1-238ENST00000493299 559 ntTSL 49.44□□□□□ -0.91e-9■□□□□ 9.6
PRPF8Q6P2Q9 SHF-203ENST00000558294 604 ntAPPRIS ALT2 TSL 29.27□□□□□ -0.925e-11■□□□□ 9.6
PRPF8Q6P2Q9 EIF4G1-217ENST00000428387 524 ntTSL 48.93□□□□□ -0.981e-9■□□□□ 9.6
PRPF8Q6P2Q9 EIF4G1-215ENST00000427607 596 ntTSL 28.52□□□□□ -1.051e-9■□□□□ 9.6
PRPF8Q6P2Q9 EIF4G1-229ENST00000457456 983 ntTSL 27.4□□□□□ -1.221e-9■□□□□ 9.6
PRPF8Q6P2Q9 CABLES1-209ENST00000583220 519 ntTSL 36.97□□□□□ -1.293e-7■□□□□ 9.6
PRPF8Q6P2Q9 CABLES1-204ENST00000578052 579 ntTSL 44.73□□□□□ -1.653e-7■□□□□ 9.6
PRPF8Q6P2Q9 SORBS3-208ENST00000520207 576 ntTSL 216.99■□□□□ 0.316e-7■□□□□ 9.6
PRPF8Q6P2Q9 RHOBTB3-202ENST00000502541 693 ntTSL 50.69□□□□□ -2.31e-6■□□□□ 9.6
PRPF8Q6P2Q9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.83■■□□□ 1.251e-6■□□□□ 9.6
PRPF8Q6P2Q9 RPS8-205ENST00000474582 391 ntTSL 1 (best)9.93□□□□□ -0.823e-48■□□□□ 9.6
PRPF8Q6P2Q9 RPS8-206ENST00000484599 852 ntTSL 39.89□□□□□ -0.833e-48■□□□□ 9.6
PRPF8Q6P2Q9 ADCY7-211ENST00000568731 484 ntTSL 313.41□□□□□ -0.262e-7■□□□□ 9.6
PRPF8Q6P2Q9 COQ8A-204ENST00000476488 264 ntTSL 311.61□□□□□ -0.553e-22■□□□□ 9.6
PRPF8Q6P2Q9 KIF12-205ENST00000498016 400 ntTSL 510.67□□□□□ -0.71e-7■□□□□ 9.6
PRPF8Q6P2Q9 PSME2-206ENST00000559042 643 nt11.34□□□□□ -0.598e-7■□□□□ 9.5
PRPF8Q6P2Q9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.5■■□□□ 1.032e-6■□□□□ 9.5
PRPF8Q6P2Q9 EXOSC10-204ENST00000469634 2361 ntTSL 410.46□□□□□ -0.731e-6■□□□□ 9.5
PRPF8Q6P2Q9 EXOSC10-208ENST00000478271 608 ntTSL 25.54□□□□□ -1.521e-6■□□□□ 9.5
PRPF8Q6P2Q9 BAIAP2-217ENST00000574688 575 ntTSL 516.35■□□□□ 0.214e-7■□□□□ 9.5
PRPF8Q6P2Q9 HM13-225ENST00000619859 455 ntTSL 35.87□□□□□ -1.472e-12■□□□□ 9.5
PRPF8Q6P2Q9 BMP2K-207ENST00000515075 602 ntTSL 3-0.44□□□□□ -2.482e-8■□□□□ 9.5
PRPF8Q6P2Q9 MT-TG-201ENST00000387429 68 ntBASIC-4.16□□□□□ -3.072e-8■□□□□ 9.5
PRPF8Q6P2Q9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.16■■□□□ 1.462e-8■□□□□ 9.5
PRPF8Q6P2Q9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.742e-8■□□□□ 9.5
PRPF8Q6P2Q9 CDK2AP1-202ENST00000535796 344 ntTSL 217.52■□□□□ 0.392e-8■□□□□ 9.5
PRPF8Q6P2Q9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.73■□□□□ 0.112e-8■□□□□ 9.5
PRPF8Q6P2Q9 SPOP-215ENST00000509765 613 ntTSL 213.61□□□□□ -0.232e-8■□□□□ 9.5
PRPF8Q6P2Q9 SPOP-204ENST00000502385 574 ntTSL 412.61□□□□□ -0.392e-8■□□□□ 9.5
PRPF8Q6P2Q9 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.492e-8■□□□□ 9.5
PRPF8Q6P2Q9 SPOP-213ENST00000508805 428 ntTSL 311.77□□□□□ -0.522e-8■□□□□ 9.5
PRPF8Q6P2Q9 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.532e-8■□□□□ 9.5
PRPF8Q6P2Q9 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.36□□□□□ -0.592e-8■□□□□ 9.5
PRPF8Q6P2Q9 SPOP-203ENST00000451526 450 ntTSL 210.86□□□□□ -0.672e-8■□□□□ 9.5
PRPF8Q6P2Q9 TMEM94-207ENST00000578624 583 ntTSL 410.64□□□□□ -0.712e-8■□□□□ 9.5
PRPF8Q6P2Q9 CDK2AP1-204ENST00000538446 1161 ntTSL 5 BASIC10.43□□□□□ -0.742e-8■□□□□ 9.5
PRPF8Q6P2Q9 ACAA1-210ENST00000451419 964 ntTSL 38.82□□□□□ -12e-8■□□□□ 9.5
PRPF8Q6P2Q9 CD59-208ENST00000527577 686 ntAPPRIS P2 TSL 3 BASIC8.57□□□□□ -1.042e-8■□□□□ 9.5
PRPF8Q6P2Q9 CD59-213ENST00000533403 1847 ntTSL 3 BASIC8.11□□□□□ -1.112e-8■□□□□ 9.5
PRPF8Q6P2Q9 CDK2AP1-206ENST00000544658 931 ntTSL 2 BASIC7.85□□□□□ -1.152e-8■□□□□ 9.5
PRPF8Q6P2Q9 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.182e-8■□□□□ 9.5
PRPF8Q6P2Q9 CLINT1-204ENST00000521615 399 ntTSL 34.4□□□□□ -1.712e-6■□□□□ 9.5
PRPF8Q6P2Q9 SMCHD1-205ENST00000581383 806 ntTSL 31.04□□□□□ -2.241e-8■□□□□ 9.5
PRPF8Q6P2Q9 PNPLA6-213ENST00000595889 602 ntTSL 212.38□□□□□ -0.434e-7■□□□□ 9.5
PRPF8Q6P2Q9 ARID1B-218ENST00000636748 8853 ntTSL 27.63□□□□□ -1.193e-7■□□□□ 9.5
PRPF8Q6P2Q9 ARID1B-235ENST00000638000 1401 ntTSL 56.6□□□□□ -1.353e-7■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-211ENST00000580691 1127 ntTSL 1 (best)19.43■□□□□ 0.72e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-207ENST00000577989 542 ntTSL 419.13■□□□□ 0.652e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-208ENST00000578016 530 ntTSL 416.43■□□□□ 0.222e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.96■□□□□ 0.152e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.87■□□□□ 0.132e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-212ENST00000581163 869 ntTSL 215.84■□□□□ 0.132e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.79■□□□□ 0.122e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-220ENST00000584291 848 ntTSL 315.3■□□□□ 0.042e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.012e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.43□□□□□ -0.12e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.19□□□□□ -0.142e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-206ENST00000577368 753 ntTSL 214.09□□□□□ -0.152e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.9□□□□□ -0.52e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.512e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.62e-8■□□□□ 9.5
PRPF8Q6P2Q9 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.742e-8■□□□□ 9.5
PRPF8Q6P2Q9 ZDHHC14-209ENST00000523706 5146 ntTSL 210.23□□□□□ -0.772e-8■□□□□ 9.5
PRPF8Q6P2Q9 ZDHHC14-205ENST00000422910 2883 ntTSL 210.23□□□□□ -0.772e-8■□□□□ 9.5
PRPF8Q6P2Q9 ZDHHC14-206ENST00000517432 3646 ntTSL 28.97□□□□□ -0.972e-8■□□□□ 9.5
PRPF8Q6P2Q9 GDPD5-207ENST00000528031 724 ntTSL 213.9□□□□□ -0.182e-14■□□□□ 9.5
PRPF8Q6P2Q9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.22■□□□□ 0.352e-7■□□□□ 9.5
PRPF8Q6P2Q9 ASNA1-203ENST00000590633 592 ntTSL 216.8■□□□□ 0.282e-7■□□□□ 9.5
PRPF8Q6P2Q9 SLC30A9-204ENST00000510460 819 ntTSL 216.02■□□□□ 0.152e-7■□□□□ 9.5
PRPF8Q6P2Q9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.86■□□□□ 0.132e-7■□□□□ 9.5
PRPF8Q6P2Q9 ASNA1-202ENST00000586561 848 ntTSL 215.35■□□□□ 0.052e-7■□□□□ 9.5
PRPF8Q6P2Q9 CRELD2-207ENST00000462253 471 ntTSL 515.29■□□□□ 0.042e-7■□□□□ 9.5
PRPF8Q6P2Q9 EBP-203ENST00000446158 714 ntTSL 515.12■□□□□ 0.016e-10■□□□□ 9.5
PRPF8Q6P2Q9 TMEM198B-207ENST00000635938 593 ntTSL 214.91□□□□□ -0.022e-7■□□□□ 9.5
PRPF8Q6P2Q9 TMEM198B-212ENST00000637087 532 ntTSL 314.91□□□□□ -0.022e-7■□□□□ 9.5
PRPF8Q6P2Q9 DAP-205ENST00000510546 780 ntTSL 214.87□□□□□ -0.032e-7■□□□□ 9.5
PRPF8Q6P2Q9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.062e-6■□□□□ 9.5
PRPF8Q6P2Q9 FAM32A-203ENST00000587351 401 ntTSL 514.43□□□□□ -0.12e-7■□□□□ 9.5
PRPF8Q6P2Q9 EBP-201ENST00000276096 904 ntTSL 214.23□□□□□ -0.136e-10■□□□□ 9.5
PRPF8Q6P2Q9 MFSD10-207ENST00000508276 697 ntTSL 514.13□□□□□ -0.152e-7■□□□□ 9.5
PRPF8Q6P2Q9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.162e-6■□□□□ 9.5
PRPF8Q6P2Q9 TMEM198B-214ENST00000637783 578 ntTSL 413.9□□□□□ -0.182e-7■□□□□ 9.5
PRPF8Q6P2Q9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.192e-6■□□□□ 9.5
PRPF8Q6P2Q9 TMEM198B-210ENST00000636659 633 ntTSL 513.64□□□□□ -0.232e-7■□□□□ 9.5
PRPF8Q6P2Q9 ING5-203ENST00000433036 415 ntTSL 313.48□□□□□ -0.252e-7■□□□□ 9.5
PRPF8Q6P2Q9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.282e-7■□□□□ 9.5
Retrieved 100 of 73,762 protein–RNA pairs in 511.7 ms