Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 CCDC162P-202ENST00000368966 6751 ntBASIC8.33□□□□□ -1.08
COL15A1P39059 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC8.33□□□□□ -1.08
COL15A1P39059 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8.33□□□□□ -1.08
COL15A1P39059 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC8.33□□□□□ -1.08
COL15A1P39059 RBMY3AP-201ENST00000449381 1145 ntBASIC8.33□□□□□ -1.08
COL15A1P39059 PPIAP20-201ENST00000449839 135 ntBASIC8.33□□□□□ -1.08
COL15A1P39059 TVP23CP1-201ENST00000450317 639 ntBASIC8.33□□□□□ -1.08
COL15A1P39059 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC8.33□□□□□ -1.08
COL15A1P39059 AC068228.1-201ENST00000461723 211 ntBASIC8.33□□□□□ -1.08
COL15A1P39059 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC8.33□□□□□ -1.08
COL15A1P39059 ASB8-203ENST00000535988 679 ntTSL 2 BASIC8.33□□□□□ -1.08
COL15A1P39059 CYCSP38-201ENST00000559840 322 ntBASIC8.33□□□□□ -1.08
COL15A1P39059 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC8.33□□□□□ -1.08
COL15A1P39059 MIR4701-201ENST00000583094 63 ntBASIC8.33□□□□□ -1.08
COL15A1P39059 AP001437.1-201ENST00000608783 456 ntBASIC8.33□□□□□ -1.08
COL15A1P39059 MIR6729-201ENST00000618194 65 ntBASIC8.33□□□□□ -1.08
COL15A1P39059 SNX18P12-201ENST00000624821 759 ntBASIC8.33□□□□□ -1.08
COL15A1P39059 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC8.33□□□□□ -1.08
COL15A1P39059 LINC02495-203ENST00000636704 242 ntBASIC8.33□□□□□ -1.08
COL15A1P39059 SAMMSON-214ENST00000641395 1264 ntBASIC8.33□□□□□ -1.08
COL15A1P39059 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.33□□□□□ -1.08
COL15A1P39059 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
COL15A1P39059 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.32□□□□□ -1.08
COL15A1P39059 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC8.32□□□□□ -1.08
COL15A1P39059 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC8.32□□□□□ -1.08
COL15A1P39059 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8.32□□□□□ -1.08
COL15A1P39059 AC083806.2-201ENST00000617795 2685 ntBASIC8.32□□□□□ -1.08
COL15A1P39059 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 AC009135.2-201ENST00000624136 1768 ntBASIC8.32□□□□□ -1.08
COL15A1P39059 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC8.32□□□□□ -1.08
COL15A1P39059 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
COL15A1P39059 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
COL15A1P39059 AL713922.1-201ENST00000416477 747 ntBASIC8.32□□□□□ -1.08
COL15A1P39059 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC8.32□□□□□ -1.08
COL15A1P39059 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC8.32□□□□□ -1.08
COL15A1P39059 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC8.32□□□□□ -1.08
COL15A1P39059 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC8.32□□□□□ -1.08
COL15A1P39059 IGKV1OR22-1-201ENST00000521497 360 ntBASIC8.32□□□□□ -1.08
COL15A1P39059 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC8.32□□□□□ -1.08
COL15A1P39059 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC8.32□□□□□ -1.08
COL15A1P39059 AC008055.1-201ENST00000547032 609 ntBASIC8.32□□□□□ -1.08
COL15A1P39059 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC8.32□□□□□ -1.08
COL15A1P39059 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC8.32□□□□□ -1.08
COL15A1P39059 RN7SL208P-201ENST00000577964 296 ntBASIC8.32□□□□□ -1.08
COL15A1P39059 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC8.32□□□□□ -1.08
COL15A1P39059 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.32□□□□□ -1.08
COL15A1P39059 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC8.32□□□□□ -1.08
COL15A1P39059 AL049840.5-201ENST00000602827 552 ntBASIC8.32□□□□□ -1.08
COL15A1P39059 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.32□□□□□ -1.08
COL15A1P39059 AC005277.2-201ENST00000617898 390 ntBASIC8.32□□□□□ -1.08
COL15A1P39059 AL354718.1-201ENST00000619764 589 ntBASIC8.32□□□□□ -1.08
COL15A1P39059 AC073862.4-201ENST00000622982 854 ntBASIC8.32□□□□□ -1.08
COL15A1P39059 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC8.32□□□□□ -1.08
COL15A1P39059 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
COL15A1P39059 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC8.32□□□□□ -1.08
COL15A1P39059 AL359922.2-201ENST00000581788 3017 ntBASIC8.32□□□□□ -1.08
COL15A1P39059 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 EEF1A1P21-201ENST00000512363 1344 ntBASIC8.32□□□□□ -1.08
COL15A1P39059 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
COL15A1P39059 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 AC087392.3-202ENST00000358446 1754 ntBASIC8.31□□□□□ -1.08
COL15A1P39059 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.31□□□□□ -1.08
COL15A1P39059 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC8.31□□□□□ -1.08
COL15A1P39059 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.31□□□□□ -1.08
COL15A1P39059 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC8.31□□□□□ -1.08
COL15A1P39059 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC8.31□□□□□ -1.08
COL15A1P39059 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
COL15A1P39059 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms