RNA–Protein interactions for RNA: ENST00000574856.1

AC139099.3-202, humanhuman

TSL 2 BASIC

Gene AC139099.3, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC139099.3-202ENST00000574856 AEBP2Q6ZN18 517 aaPredicted RBP30.85■■■□□ 2.53
AC139099.3-202ENST00000574856 CHIC1Q5VXU3 224 aa29.1■■■□□ 2.25
AC139099.3-202ENST00000574856 SENP3Q9H4L4 574 aaPredicted RBP26.21■■□□□ 1.79
AC139099.3-202ENST00000574856 PHF23Q9BUL5 403 aaPredicted RBP25.94■■□□□ 1.74
AC139099.3-202ENST00000574856 FOXD1Q16676 465 aa24.53■■□□□ 1.52
AC139099.3-202ENST00000574856 PLPPR3Q6T4P5 718 aa23.17■■□□□ 1.3
AC139099.3-202ENST00000574856 PPP6R1Q9UPN7 881 aa22.92■■□□□ 1.26
AC139099.3-202ENST00000574856 MSH5O43196 834 aa22.89■■□□□ 1.25
AC139099.3-202ENST00000574856 PIAS4Q8N2W9 510 aaPredicted RBP22.88■■□□□ 1.25
AC139099.3-202ENST00000574856 ADRA2BP18089 450 aa22.84■■□□□ 1.25
AC139099.3-202ENST00000574856 POTEDQ86YR6 584 aa22.64■■□□□ 1.21
AC139099.3-202ENST00000574856 MAPK8IP2Q13387 824 aaPredicted RBP21.05■□□□□ 0.96
AC139099.3-202ENST00000574856 DMRT2Q9Y5R5 561 aa20.79■□□□□ 0.92
AC139099.3-202ENST00000574856 SCAF1Q9H7N4 1312 aaKnown RBP20.73■□□□□ 0.91
AC139099.3-202ENST00000574856 PPP4R3CPQ6ZMV5 832 aa20.36■□□□□ 0.85
AC139099.3-202ENST00000574856 DCAF8L1A6NGE4 600 aa20.05■□□□□ 0.8
AC139099.3-202ENST00000574856 HOXD11P31277 338 aaPredicted RBP19.96■□□□□ 0.79
AC139099.3-202ENST00000574856 CNKSR2Q8WXI2 1034 aa19.94■□□□□ 0.78
AC139099.3-202ENST00000574856 CACNB1Q02641 598 aaPredicted RBP19.8■□□□□ 0.76
AC139099.3-202ENST00000574856 RNF216Q9NWF9 866 aaPredicted RBP19.78■□□□□ 0.76
AC139099.3-202ENST00000574856 RNF39Q9H2S5 420 aa19.57■□□□□ 0.72
AC139099.3-202ENST00000574856 NCBP3Q53F19 620 aaKnown RBP19.46■□□□□ 0.71
AC139099.3-202ENST00000574856 NPM3O75607 178 aaKnown RBP19.27■□□□□ 0.68
AC139099.3-202ENST00000574856 C1QBPQ07021 282 aaKnown RBP19.24■□□□□ 0.67
AC139099.3-202ENST00000574856 DNAJC5BQ9UF47 199 aa19.18■□□□□ 0.66
AC139099.3-202ENST00000574856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.09■□□□□ 0.65
AC139099.3-202ENST00000574856 KCNA4P22459 653 aa18.84■□□□□ 0.61
AC139099.3-202ENST00000574856 U3KPZ7 1027 aaPredicted RBP18.67■□□□□ 0.58
AC139099.3-202ENST00000574856 SPINK5Q9NQ38 1064 aaPredicted RBP18.49■□□□□ 0.55
AC139099.3-202ENST00000574856 SLC4A2P04920 1241 aa18.45■□□□□ 0.54
AC139099.3-202ENST00000574856 CAPN15O75808 1086 aa18.43■□□□□ 0.54
AC139099.3-202ENST00000574856 DSG3P32926 999 aa18.32■□□□□ 0.52
AC139099.3-202ENST00000574856 TRHP20396 242 aaPredicted RBP18.14■□□□□ 0.49
AC139099.3-202ENST00000574856 ABCB7O75027 752 aa18.04■□□□□ 0.48
AC139099.3-202ENST00000574856 APLP2Q06481 763 aa17.98■□□□□ 0.47
AC139099.3-202ENST00000574856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
AC139099.3-202ENST00000574856 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
AC139099.3-202ENST00000574856 ZNF219Q9P2Y4 722 aaPredicted RBP17.96■□□□□ 0.47
AC139099.3-202ENST00000574856 SAMD1Q6SPF0 538 aaPredicted RBP17.9■□□□□ 0.46
AC139099.3-202ENST00000574856 MYCNP04198 464 aaPredicted RBP17.75■□□□□ 0.43
AC139099.3-202ENST00000574856 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
AC139099.3-202ENST00000574856 POTEHQ6S545 545 aa17.7■□□□□ 0.42
AC139099.3-202ENST00000574856 POLA2Q14181 598 aa17.6■□□□□ 0.41
AC139099.3-202ENST00000574856 FOXD4L1Q9NU39 408 aa17.53■□□□□ 0.4
AC139099.3-202ENST00000574856 ATF5Q9Y2D1 282 aaPredicted RBP17.49■□□□□ 0.39
AC139099.3-202ENST00000574856 RBM42Q9BTD8 480 aaKnown RBP17.38■□□□□ 0.37
AC139099.3-202ENST00000574856 ZBTB22O15209 634 aa17.34■□□□□ 0.37
AC139099.3-202ENST00000574856 CHRDL2Q6WN34 429 aa17.13■□□□□ 0.33
AC139099.3-202ENST00000574856 ZBTB12Q9Y330 459 aaPredicted RBP17.08■□□□□ 0.32
AC139099.3-202ENST00000574856 OSCARQ8IYS5 282 aa17.04■□□□□ 0.32
AC139099.3-202ENST00000574856 AKT1S1Q96B36 256 aa17■□□□□ 0.31
AC139099.3-202ENST00000574856 ATXN8OSP0DMR3 200 aa16.93■□□□□ 0.3
AC139099.3-202ENST00000574856 REM2Q8IYK8 340 aaPredicted RBP16.91■□□□□ 0.3
AC139099.3-202ENST00000574856 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
AC139099.3-202ENST00000574856 PIP4P2Q8N4L2 257 aa16.72■□□□□ 0.27
AC139099.3-202ENST00000574856 FBLN2P98095 1184 aa16.69■□□□□ 0.26
AC139099.3-202ENST00000574856 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
AC139099.3-202ENST00000574856 SPDYE2BA6NHP3 402 aa16.6■□□□□ 0.25
AC139099.3-202ENST00000574856 SPDYE6P0CI01 402 aa16.6■□□□□ 0.25
AC139099.3-202ENST00000574856 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
AC139099.3-202ENST00000574856 FXR2P51116 673 aaKnown RBP eCLIP16.57■□□□□ 0.24
AC139099.3-202ENST00000574856 SP7Q8TDD2 431 aaPredicted RBP16.53■□□□□ 0.24
AC139099.3-202ENST00000574856 HAX1O00165 279 aa16.47■□□□□ 0.23
AC139099.3-202ENST00000574856 ZNF692Q9BU19 519 aaPredicted RBP16.46■□□□□ 0.23
AC139099.3-202ENST00000574856 CLEC11AQ9Y240 323 aa16.43■□□□□ 0.22
AC139099.3-202ENST00000574856 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
AC139099.3-202ENST00000574856 SSUH2Q9Y2M2 353 aa16.39■□□□□ 0.21
AC139099.3-202ENST00000574856 SPDYE1Q8NFV5 336 aaPredicted RBP16.35■□□□□ 0.21
AC139099.3-202ENST00000574856 EVX2Q03828 476 aa16.33■□□□□ 0.2
AC139099.3-202ENST00000574856 PRKAR2AP13861 404 aaKnown RBP16.31■□□□□ 0.2
AC139099.3-202ENST00000574856 PABPN1Q86U42 306 aaKnown RBP eCLIP16.22■□□□□ 0.19
AC139099.3-202ENST00000574856 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
AC139099.3-202ENST00000574856 CHADLQ6NUI6 762 aa16.16■□□□□ 0.18
AC139099.3-202ENST00000574856 PRR29P0C7W0 189 aa16.09■□□□□ 0.17
AC139099.3-202ENST00000574856 C19orf67A6NJJ6 358 aa16.05■□□□□ 0.16
AC139099.3-202ENST00000574856 GABBR2O75899 941 aa15.88■□□□□ 0.13
AC139099.3-202ENST00000574856 FARP1Q9Y4F1 1045 aaPredicted RBP15.83■□□□□ 0.12
AC139099.3-202ENST00000574856 SPDYE4A6NLX3 237 aa15.77■□□□□ 0.12
AC139099.3-202ENST00000574856 CD44P16070 742 aaKnown RBP15.77■□□□□ 0.12
AC139099.3-202ENST00000574856 CREBZFQ9NS37 354 aa15.69■□□□□ 0.1
AC139099.3-202ENST00000574856 STAG3Q9UJ98 1225 aa15.64■□□□□ 0.09
AC139099.3-202ENST00000574856 POTEIP0CG38 1075 aa15.58■□□□□ 0.08
AC139099.3-202ENST00000574856 ZRANB1Q9UGI0 708 aa15.55■□□□□ 0.08
AC139099.3-202ENST00000574856 LHX8Q68G74 356 aa15.53■□□□□ 0.08
AC139099.3-202ENST00000574856 ZNF579Q8NAF0 562 aaKnown RBP15.47■□□□□ 0.07
AC139099.3-202ENST00000574856 NISCHQ9Y2I1 1504 aa15.44■□□□□ 0.06
AC139099.3-202ENST00000574856 CLCN6P51797 869 aa15.4■□□□□ 0.06
AC139099.3-202ENST00000574856 DCBLD2Q96PD2 775 aa15.4■□□□□ 0.06
AC139099.3-202ENST00000574856 MNX1P50219 401 aaPredicted RBP15.39■□□□□ 0.05
AC139099.3-202ENST00000574856 GALR2O43603 387 aaPredicted RBP15.38■□□□□ 0.05
AC139099.3-202ENST00000574856 PHF12Q96QT6 1004 aa15.36■□□□□ 0.05
AC139099.3-202ENST00000574856 NPM1P06748 294 aaKnown RBP eCLIP15.32■□□□□ 0.04
AC139099.3-202ENST00000574856 PAK3O75914 559 aaPredicted RBP15.31■□□□□ 0.04
AC139099.3-202ENST00000574856 PROM2Q8N271 834 aa15.3■□□□□ 0.04
AC139099.3-202ENST00000574856 TSPYL2Q9H2G4 693 aaPredicted RBP15.16■□□□□ 0.02
AC139099.3-202ENST00000574856 PELP1Q8IZL8 1130 aaKnown RBP15.12■□□□□ 0.01
AC139099.3-202ENST00000574856 MS4A3Q96HJ5 214 aa15.11■□□□□ 0.01
AC139099.3-202ENST00000574856 MIER1Q8N108 512 aa15.09■□□□□ 0.01
AC139099.3-202ENST00000574856 POTEB2H3BUK9 544 aa15.08■□□□□ 0
AC139099.3-202ENST00000574856 CCDC61Q9Y6R9 512 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms