Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC116631.1-202ENST00000640984 683 ntBASIC7.15□□□□□ -1.26
RB1P06400 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
RB1P06400 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
RB1P06400 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.15□□□□□ -1.27
RB1P06400 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
RB1P06400 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RB1P06400 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
RB1P06400 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
RB1P06400 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
RB1P06400 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RB1P06400 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.15□□□□□ -1.27
RB1P06400 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RB1P06400 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
RB1P06400 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
RB1P06400 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
RB1P06400 AC010401.2-201ENST00000575137 4934 ntBASIC7.15□□□□□ -1.27
RB1P06400 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.14□□□□□ -1.27
RB1P06400 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.14□□□□□ -1.27
RB1P06400 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
RB1P06400 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.14□□□□□ -1.27
RB1P06400 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.14□□□□□ -1.27
RB1P06400 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
RB1P06400 GCNT1P4-201ENST00000404096 329 ntBASIC7.14□□□□□ -1.27
RB1P06400 SNORA11B-201ENST00000408175 129 ntBASIC7.14□□□□□ -1.27
RB1P06400 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.14□□□□□ -1.27
RB1P06400 AC009500.1-201ENST00000420684 583 ntBASIC7.14□□□□□ -1.27
RB1P06400 GSTA6P-201ENST00000424144 582 ntBASIC7.14□□□□□ -1.27
RB1P06400 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RB1P06400 OR2L9P-201ENST00000444456 913 ntBASIC7.14□□□□□ -1.27
RB1P06400 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.14□□□□□ -1.27
RB1P06400 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.14□□□□□ -1.27
RB1P06400 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 IGLVIV-64-201ENST00000518581 301 ntBASIC7.14□□□□□ -1.27
RB1P06400 IGKV3D-34-201ENST00000522638 302 ntBASIC7.14□□□□□ -1.27
RB1P06400 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC7.14□□□□□ -1.27
RB1P06400 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.14□□□□□ -1.27
RB1P06400 AC023968.1-201ENST00000560719 475 ntBASIC7.14□□□□□ -1.27
RB1P06400 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.14□□□□□ -1.27
RB1P06400 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.14□□□□□ -1.27
RB1P06400 AC005702.3-201ENST00000585345 1447 ntBASIC7.14□□□□□ -1.27
RB1P06400 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.14□□□□□ -1.27
RB1P06400 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.14□□□□□ -1.27
RB1P06400 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.14□□□□□ -1.27
RB1P06400 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.14□□□□□ -1.27
RB1P06400 AL357140.4-201ENST00000636827 412 ntBASIC7.14□□□□□ -1.27
RB1P06400 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
RB1P06400 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
RB1P06400 AL596275.2-203ENST00000641951 371 ntBASIC7.14□□□□□ -1.27
RB1P06400 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RB1P06400 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RB1P06400 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.14□□□□□ -1.27
RB1P06400 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.14□□□□□ -1.27
RB1P06400 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
RB1P06400 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RB1P06400 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.14□□□□□ -1.27
RB1P06400 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
RB1P06400 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
RB1P06400 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.13□□□□□ -1.27
RB1P06400 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RB1P06400 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RB1P06400 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.13□□□□□ -1.27
RB1P06400 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RB1P06400 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.13□□□□□ -1.27
RB1P06400 BRD7P1-201ENST00000557705 1915 ntBASIC7.13□□□□□ -1.27
RB1P06400 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RB1P06400 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.13□□□□□ -1.27
RB1P06400 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
RB1P06400 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.13□□□□□ -1.27
RB1P06400 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RB1P06400 CDY7P-201ENST00000429883 1604 ntBASIC7.13□□□□□ -1.27
RB1P06400 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
RB1P06400 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.13□□□□□ -1.27
RB1P06400 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RB1P06400 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RB1P06400 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.13□□□□□ -1.27
RB1P06400 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RB1P06400 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RB1P06400 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RB1P06400 LCN1P2-201ENST00000372030 223 ntBASIC7.13□□□□□ -1.27
RB1P06400 AL139805.1-201ENST00000407837 289 ntBASIC7.13□□□□□ -1.27
RB1P06400 SNORA77.2-201ENST00000408571 112 ntBASIC7.13□□□□□ -1.27
RB1P06400 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.13□□□□□ -1.27
RB1P06400 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.13□□□□□ -1.27
RB1P06400 AC092865.3-201ENST00000425390 1026 ntBASIC7.13□□□□□ -1.27
RB1P06400 RPSAP65-201ENST00000429660 595 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms