RNA–Protein interactions for RNA: ENST00000438447.1

PDZD2-202, Transcript of PDZ domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD2, Length 11,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-202ENST00000438447 NISCHQ9Y2I1 1504 aa12.16□□□□□ -0.46
PDZD2-202ENST00000438447 MYT1Q01538 1121 aa12.05□□□□□ -0.48
PDZD2-202ENST00000438447 PELP1Q8IZL8 1130 aaKnown RBP12.01□□□□□ -0.49
PDZD2-202ENST00000438447 DCAF8L2P0C7V8 631 aa12□□□□□ -0.49
PDZD2-202ENST00000438447 SUPT5HO00267 1087 aaKnown RBP11.51□□□□□ -0.57
PDZD2-202ENST00000438447 SHROOM4Q9ULL8 1493 aa11.38□□□□□ -0.59
PDZD2-202ENST00000438447 TTBK1Q5TCY1 1321 aaPredicted RBP11.21□□□□□ -0.62
PDZD2-202ENST00000438447 ZEB1P37275 1124 aaPredicted RBP11.19□□□□□ -0.62
PDZD2-202ENST00000438447 CENPBP07199 599 aaPredicted RBP11.15□□□□□ -0.62
PDZD2-202ENST00000438447 ERICH6Q7L0X2 663 aa11.14□□□□□ -0.63
PDZD2-202ENST00000438447 EHMT2Q96KQ7 1210 aa11.12□□□□□ -0.63
PDZD2-202ENST00000438447 CCER1Q8TC90 406 aaPredicted RBP11.07□□□□□ -0.64
PDZD2-202ENST00000438447 APLP2Q06481 763 aa10.95□□□□□ -0.66
PDZD2-202ENST00000438447 CCDC180Q9P1Z9 1646 aa10.86□□□□□ -0.67
PDZD2-202ENST00000438447 FAM9AQ8IZU1 332 aaPredicted RBP10.86□□□□□ -0.67
PDZD2-202ENST00000438447 PCGF6Q9BYE7 350 aa10.84□□□□□ -0.67
PDZD2-202ENST00000438447 YTHDC1Q96MU7 727 aaKnown RBP10.81□□□□□ -0.68
PDZD2-202ENST00000438447 HRCP23327 699 aa10.79□□□□□ -0.68
PDZD2-202ENST00000438447 NEFLP07196 543 aa10.74□□□□□ -0.69
PDZD2-202ENST00000438447 TRIM41Q8WV44 630 aa10.67□□□□□ -0.7
PDZD2-202ENST00000438447 RANGAP1P46060 587 aaPredicted RBP10.64□□□□□ -0.71
PDZD2-202ENST00000438447 TRIM26Q12899 539 aaPredicted RBP10.6□□□□□ -0.71
PDZD2-202ENST00000438447 DCAF1Q9Y4B6 1507 aa10.58□□□□□ -0.72
PDZD2-202ENST00000438447 CLSPNQ9HAW4 1339 aa10.58□□□□□ -0.72
PDZD2-202ENST00000438447 UBTFP17480 764 aaKnown RBP10.57□□□□□ -0.72
PDZD2-202ENST00000438447 RTL5Q5HYW3 569 aaPredicted RBP10.52□□□□□ -0.73
PDZD2-202ENST00000438447 ATP1B4Q9UN42 357 aaPredicted RBP10.49□□□□□ -0.73
PDZD2-202ENST00000438447 DAXXQ9UER7 740 aaPredicted RBP10.45□□□□□ -0.74
PDZD2-202ENST00000438447 GLIPR1L2Q4G1C9 344 aa10.39□□□□□ -0.75
PDZD2-202ENST00000438447 PPARGC1BQ86YN6 1023 aaKnown RBP10.39□□□□□ -0.75
PDZD2-202ENST00000438447 MYT1LQ9UL68 1186 aa10.3□□□□□ -0.76
PDZD2-202ENST00000438447 CHIC1Q5VXU3 224 aa10.3□□□□□ -0.76
PDZD2-202ENST00000438447 ZCCHC6Q5VYS8 1495 aaKnown RBP10.26□□□□□ -0.77
PDZD2-202ENST00000438447 ZNF316A6NFI3 1004 aaPredicted RBP10.26□□□□□ -0.77
PDZD2-202ENST00000438447 LOC105371045A0A1W2PR82 267 aa10.24□□□□□ -0.77
PDZD2-202ENST00000438447 GTF3C3Q9Y5Q9 886 aa10.23□□□□□ -0.77
PDZD2-202ENST00000438447 ITGAEP38570 1179 aa10.2□□□□□ -0.78
PDZD2-202ENST00000438447 HNRNPUL2Q1KMD3 747 aaKnown RBP10.18□□□□□ -0.78
PDZD2-202ENST00000438447 EIF5BO60841 1220 aaKnown RBP10.18□□□□□ -0.78
PDZD2-202ENST00000438447 DIEXFQ68CQ4 756 aaKnown RBP10.14□□□□□ -0.79
PDZD2-202ENST00000438447 POLR3GLQ9BT43 218 aa10.14□□□□□ -0.79
PDZD2-202ENST00000438447 ACIN1Q9UKV3 1341 aaKnown RBP10.13□□□□□ -0.79
PDZD2-202ENST00000438447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.12□□□□□ -0.79
PDZD2-202ENST00000438447 BCL11AQ9H165 835 aa10.08□□□□□ -0.8
PDZD2-202ENST00000438447 CDK11AQ9UQ88 783 aaPredicted RBP10.02□□□□□ -0.8
PDZD2-202ENST00000438447 ABCC9O60706 1549 aa10.01□□□□□ -0.81
PDZD2-202ENST00000438447 ANP32AP39687 249 aaKnown RBP9.99□□□□□ -0.81
PDZD2-202ENST00000438447 CNGB1Q14028 1251 aaPredicted RBP9.99□□□□□ -0.81
PDZD2-202ENST00000438447 SLC4A1APQ9BWU0 796 aaKnown RBP9.97□□□□□ -0.81
PDZD2-202ENST00000438447 FAM50AQ14320 339 aaKnown RBP9.97□□□□□ -0.81
PDZD2-202ENST00000438447 SCAF1Q9H7N4 1312 aaKnown RBP9.97□□□□□ -0.81
PDZD2-202ENST00000438447 BCANQ96GW7 911 aa9.97□□□□□ -0.81
PDZD2-202ENST00000438447 PABPN1Q86U42 306 aaKnown RBP eCLIP9.95□□□□□ -0.82
PDZD2-202ENST00000438447 EEA1Q15075 1411 aa9.95□□□□□ -0.82
PDZD2-202ENST00000438447 ANP32EQ9BTT0 268 aa9.92□□□□□ -0.82
PDZD2-202ENST00000438447 RB1CC1Q8TDY2 1594 aa9.92□□□□□ -0.82
PDZD2-202ENST00000438447 NACADO15069 1562 aa9.9□□□□□ -0.82
PDZD2-202ENST00000438447 TRIM52Q96A61 297 aa9.89□□□□□ -0.83
PDZD2-202ENST00000438447 NEUROD1Q13562 356 aa9.88□□□□□ -0.83
PDZD2-202ENST00000438447 MYO15BQ96JP2 1530 aa9.87□□□□□ -0.83
PDZD2-202ENST00000438447 TNNT2P45379 298 aaPredicted RBP9.85□□□□□ -0.83
PDZD2-202ENST00000438447 SCRIBQ14160 1630 aa9.84□□□□□ -0.83
PDZD2-202ENST00000438447 ANP32BQ92688 251 aaKnown RBP9.83□□□□□ -0.84
PDZD2-202ENST00000438447 ANP32CO43423 234 aa9.82□□□□□ -0.84
PDZD2-202ENST00000438447 ZNF326Q5BKZ1 582 aaKnown RBP9.81□□□□□ -0.84
PDZD2-202ENST00000438447 NBR1Q14596 966 aa9.8□□□□□ -0.84
PDZD2-202ENST00000438447 PLPPR3Q6T4P5 718 aa9.78□□□□□ -0.84
PDZD2-202ENST00000438447 SLC24A1O60721 1099 aa9.76□□□□□ -0.85
PDZD2-202ENST00000438447 CSRNP3Q8WYN3 585 aa9.76□□□□□ -0.85
PDZD2-202ENST00000438447 FBLN2P98095 1184 aa9.71□□□□□ -0.85
PDZD2-202ENST00000438447 CDK11BP21127 795 aaKnown RBP9.7□□□□□ -0.86
PDZD2-202ENST00000438447 BAZ1AQ9NRL2 1556 aaPredicted RBP9.7□□□□□ -0.86
PDZD2-202ENST00000438447 NCLP19338 710 aaKnown RBP9.7□□□□□ -0.86
PDZD2-202ENST00000438447 P3H3Q8IVL6 736 aa9.69□□□□□ -0.86
PDZD2-202ENST00000438447 GOLGA3Q08378 1498 aa9.69□□□□□ -0.86
PDZD2-202ENST00000438447 NPM2Q86SE8 214 aaKnown RBP9.68□□□□□ -0.86
PDZD2-202ENST00000438447 ARID3CA6NKF2 412 aa9.68□□□□□ -0.86
PDZD2-202ENST00000438447 CANXP27824 592 aaKnown RBP9.68□□□□□ -0.86
PDZD2-202ENST00000438447 ERICH6BQ5W0A0 696 aa9.68□□□□□ -0.86
PDZD2-202ENST00000438447 ZBTB47Q9UFB7 747 aaPredicted RBP9.65□□□□□ -0.86
PDZD2-202ENST00000438447 NEFMP07197 916 aa9.65□□□□□ -0.87
PDZD2-202ENST00000438447 NAP1L5Q96NT1 182 aaPredicted RBP9.64□□□□□ -0.87
PDZD2-202ENST00000438447 TRIM44Q96DX7 344 aaPredicted RBP9.63□□□□□ -0.87
PDZD2-202ENST00000438447 CEP164Q9UPV0 1460 aa9.63□□□□□ -0.87
PDZD2-202ENST00000438447 FKBP8Q14318 412 aa9.61□□□□□ -0.87
PDZD2-202ENST00000438447 WRNQ14191 1432 aaPredicted RBP eCLIP9.61□□□□□ -0.87
PDZD2-202ENST00000438447 TONSLQ96HA7 1378 aa9.61□□□□□ -0.87
PDZD2-202ENST00000438447 PRKCSHP14314 528 aaPredicted RBP9.61□□□□□ -0.87
PDZD2-202ENST00000438447 ZNF777Q9ULD5 760 aaPredicted RBP9.6□□□□□ -0.87
PDZD2-202ENST00000438447 CEP162Q5TB80 1403 aa9.6□□□□□ -0.87
PDZD2-202ENST00000438447 TNIKQ9UKE5 1360 aa9.59□□□□□ -0.87
PDZD2-202ENST00000438447 RTN4Q9NQC3 1192 aaKnown RBP9.58□□□□□ -0.88
PDZD2-202ENST00000438447 DEKP35659 375 aaKnown RBP9.58□□□□□ -0.88
PDZD2-202ENST00000438447 CLIP1P30622 1438 aa9.57□□□□□ -0.88
PDZD2-202ENST00000438447 BAZ1BQ9UIG0 1483 aaKnown RBP9.57□□□□□ -0.88
PDZD2-202ENST00000438447 KAT6BQ8WYB5 2073 aa9.55□□□□□ -0.88
PDZD2-202ENST00000438447 DDRGK1Q96HY6 314 aa9.54□□□□□ -0.88
PDZD2-202ENST00000438447 RSF1Q96T23 1441 aaPredicted RBP9.53□□□□□ -0.88
PDZD2-202ENST00000438447 HSP90AA1P07900 732 aaKnown RBP9.53□□□□□ -0.88
PDZD2-202ENST00000438447 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms