RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 DCAF8L2P0C7V8 631 aa12.36□□□□□ -0.43
CCDC171-201ENST00000380701 NISCHQ9Y2I1 1504 aa11.96□□□□□ -0.5
CCDC171-201ENST00000380701 FAM9AQ8IZU1 332 aaPredicted RBP11.65□□□□□ -0.55
CCDC171-201ENST00000380701 SUPT5HO00267 1087 aaKnown RBP11.49□□□□□ -0.57
CCDC171-201ENST00000380701 APLP2Q06481 763 aa11.39□□□□□ -0.59
CCDC171-201ENST00000380701 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
CCDC171-201ENST00000380701 SHROOM4Q9ULL8 1493 aa11.21□□□□□ -0.61
CCDC171-201ENST00000380701 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
CCDC171-201ENST00000380701 EHMT2Q96KQ7 1210 aa10.85□□□□□ -0.67
CCDC171-201ENST00000380701 ZEB1P37275 1124 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-201ENST00000380701 CCER1Q8TC90 406 aaPredicted RBP10.77□□□□□ -0.69
CCDC171-201ENST00000380701 UBTFP17480 764 aaKnown RBP10.76□□□□□ -0.69
CCDC171-201ENST00000380701 ATP1B4Q9UN42 357 aaPredicted RBP10.76□□□□□ -0.69
CCDC171-201ENST00000380701 CENPBP07199 599 aaPredicted RBP10.65□□□□□ -0.71
CCDC171-201ENST00000380701 RANGAP1P46060 587 aaPredicted RBP10.61□□□□□ -0.71
CCDC171-201ENST00000380701 MYT1LQ9UL68 1186 aa10.57□□□□□ -0.72
CCDC171-201ENST00000380701 PCGF6Q9BYE7 350 aa10.56□□□□□ -0.72
CCDC171-201ENST00000380701 NEFLP07196 543 aa10.54□□□□□ -0.72
CCDC171-201ENST00000380701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.54□□□□□ -0.72
CCDC171-201ENST00000380701 HNRNPUL2Q1KMD3 747 aaKnown RBP10.54□□□□□ -0.72
CCDC171-201ENST00000380701 ERICH6Q7L0X2 663 aa10.52□□□□□ -0.73
CCDC171-201ENST00000380701 TTBK1Q5TCY1 1321 aaPredicted RBP10.51□□□□□ -0.73
CCDC171-201ENST00000380701 ABCC9O60706 1549 aa10.36□□□□□ -0.75
CCDC171-201ENST00000380701 TRIM26Q12899 539 aaPredicted RBP10.32□□□□□ -0.76
CCDC171-201ENST00000380701 DAXXQ9UER7 740 aaPredicted RBP10.26□□□□□ -0.77
CCDC171-201ENST00000380701 PABPN1Q86U42 306 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC171-201ENST00000380701 CDK11AQ9UQ88 783 aaPredicted RBP10.21□□□□□ -0.78
CCDC171-201ENST00000380701 ITGAEP38570 1179 aa10.21□□□□□ -0.78
CCDC171-201ENST00000380701 POLR3GLQ9BT43 218 aa10.17□□□□□ -0.78
CCDC171-201ENST00000380701 MYT1Q01538 1121 aa10.16□□□□□ -0.78
CCDC171-201ENST00000380701 SLC4A1APQ9BWU0 796 aaKnown RBP10.15□□□□□ -0.78
CCDC171-201ENST00000380701 CHIC1Q5VXU3 224 aa10.15□□□□□ -0.78
CCDC171-201ENST00000380701 NPM1P06748 294 aaKnown RBP eCLIP10.13□□□□□ -0.79
CCDC171-201ENST00000380701 FBLN2P98095 1184 aa10.12□□□□□ -0.79
CCDC171-201ENST00000380701 TRIM52Q96A61 297 aa10.12□□□□□ -0.79
CCDC171-201ENST00000380701 YTHDC1Q96MU7 727 aaKnown RBP10.12□□□□□ -0.79
CCDC171-201ENST00000380701 ESF1Q9H501 851 aaKnown RBP10.12□□□□□ -0.79
CCDC171-201ENST00000380701 FAM50AQ14320 339 aaKnown RBP10.12□□□□□ -0.79
CCDC171-201ENST00000380701 NEFMP07197 916 aa10.1□□□□□ -0.79
CCDC171-201ENST00000380701 ZBTB47Q9UFB7 747 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-201ENST00000380701 ACIN1Q9UKV3 1341 aaKnown RBP10.05□□□□□ -0.8
CCDC171-201ENST00000380701 PPARGC1BQ86YN6 1023 aaKnown RBP10.01□□□□□ -0.81
CCDC171-201ENST00000380701 CLSPNQ9HAW4 1339 aa10□□□□□ -0.81
CCDC171-201ENST00000380701 CSRNP3Q8WYN3 585 aa9.99□□□□□ -0.81
CCDC171-201ENST00000380701 BCANQ96GW7 911 aa9.99□□□□□ -0.81
CCDC171-201ENST00000380701 HRCP23327 699 aa9.97□□□□□ -0.81
CCDC171-201ENST00000380701 ZNF316A6NFI3 1004 aaPredicted RBP9.95□□□□□ -0.82
CCDC171-201ENST00000380701 CCDC180Q9P1Z9 1646 aa9.94□□□□□ -0.82
CCDC171-201ENST00000380701 SCRIBQ14160 1630 aa9.93□□□□□ -0.82
CCDC171-201ENST00000380701 ANP32CO43423 234 aa9.93□□□□□ -0.82
CCDC171-201ENST00000380701 STAG3Q9UJ98 1225 aa9.92□□□□□ -0.82
CCDC171-201ENST00000380701 RB1CC1Q8TDY2 1594 aa9.92□□□□□ -0.82
CCDC171-201ENST00000380701 LOC105371045A0A1W2PR82 267 aa9.92□□□□□ -0.82
CCDC171-201ENST00000380701 ZNF326Q5BKZ1 582 aaKnown RBP9.87□□□□□ -0.83
CCDC171-201ENST00000380701 RTL5Q5HYW3 569 aaPredicted RBP9.87□□□□□ -0.83
CCDC171-201ENST00000380701 ZCCHC6Q5VYS8 1495 aaKnown RBP9.87□□□□□ -0.83
CCDC171-201ENST00000380701 NEUROD1Q13562 356 aa9.86□□□□□ -0.83
CCDC171-201ENST00000380701 ZNF777Q9ULD5 760 aaPredicted RBP9.86□□□□□ -0.83
CCDC171-201ENST00000380701 CANXP27824 592 aaKnown RBP9.85□□□□□ -0.83
CCDC171-201ENST00000380701 TSPY4P0CV99 314 aa9.84□□□□□ -0.83
CCDC171-201ENST00000380701 TSPY10P0CW01 314 aa9.84□□□□□ -0.83
CCDC171-201ENST00000380701 CHMP7Q8WUX9 453 aaPredicted RBP9.84□□□□□ -0.83
CCDC171-201ENST00000380701 CNGB1Q14028 1251 aaPredicted RBP9.82□□□□□ -0.84
CCDC171-201ENST00000380701 DIEXFQ68CQ4 756 aaKnown RBP9.81□□□□□ -0.84
CCDC171-201ENST00000380701 NACADO15069 1562 aa9.81□□□□□ -0.84
CCDC171-201ENST00000380701 EEA1Q15075 1411 aa9.81□□□□□ -0.84
CCDC171-201ENST00000380701 SLC24A1O60721 1099 aa9.79□□□□□ -0.84
CCDC171-201ENST00000380701 P3H3Q8IVL6 736 aa9.78□□□□□ -0.84
CCDC171-201ENST00000380701 RSF1Q96T23 1441 aaPredicted RBP9.78□□□□□ -0.84
CCDC171-201ENST00000380701 TONSLQ96HA7 1378 aa9.77□□□□□ -0.85
CCDC171-201ENST00000380701 CHGAP10645 457 aaKnown RBP9.76□□□□□ -0.85
CCDC171-201ENST00000380701 MTUS2Q5JR59 1369 aa9.74□□□□□ -0.85
CCDC171-201ENST00000380701 PLEKHD1A6NEE1 506 aa9.73□□□□□ -0.85
CCDC171-201ENST00000380701 NPM2Q86SE8 214 aaKnown RBP9.71□□□□□ -0.85
CCDC171-201ENST00000380701 ARID3CA6NKF2 412 aa9.7□□□□□ -0.86
CCDC171-201ENST00000380701 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.69□□□□□ -0.86
CCDC171-201ENST00000380701 CDCA8Q53HL2 280 aa9.68□□□□□ -0.86
CCDC171-201ENST00000380701 PPP1R15AO75807 674 aaPredicted RBP9.67□□□□□ -0.86
CCDC171-201ENST00000380701 BAZ1BQ9UIG0 1483 aaKnown RBP9.67□□□□□ -0.86
CCDC171-201ENST00000380701 UPF2Q9HAU5 1272 aaKnown RBP9.65□□□□□ -0.86
CCDC171-201ENST00000380701 ERCC6Q03468 1493 aa9.65□□□□□ -0.86
CCDC171-201ENST00000380701 EIF5BO60841 1220 aaKnown RBP9.65□□□□□ -0.86
CCDC171-201ENST00000380701 KIF27Q86VH2 1401 aa9.64□□□□□ -0.87
CCDC171-201ENST00000380701 HDGFP51858 240 aaKnown RBP9.64□□□□□ -0.87
CCDC171-201ENST00000380701 WDR43Q15061 677 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC171-201ENST00000380701 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC171-201ENST00000380701 CLIP1P30622 1438 aa9.6□□□□□ -0.87
CCDC171-201ENST00000380701 ANP32BQ92688 251 aaKnown RBP9.6□□□□□ -0.87
CCDC171-201ENST00000380701 ANP32AP39687 249 aaKnown RBP9.59□□□□□ -0.87
CCDC171-201ENST00000380701 DCAF1Q9Y4B6 1507 aa9.59□□□□□ -0.87
CCDC171-201ENST00000380701 GOLGA3Q08378 1498 aa9.59□□□□□ -0.87
CCDC171-201ENST00000380701 C14orf37Q86TY3 774 aa9.58□□□□□ -0.88
CCDC171-201ENST00000380701 MYH16Q9H6N6 1097 aa9.58□□□□□ -0.88
CCDC171-201ENST00000380701 CFAP53Q96M91 514 aa9.58□□□□□ -0.88
CCDC171-201ENST00000380701 WRNQ14191 1432 aaPredicted RBP eCLIP9.57□□□□□ -0.88
CCDC171-201ENST00000380701 ARID4BQ4LE39 1312 aaPredicted RBP9.57□□□□□ -0.88
CCDC171-201ENST00000380701 BAZ1AQ9NRL2 1556 aaPredicted RBP9.57□□□□□ -0.88
CCDC171-201ENST00000380701 TMC1Q8TDI8 760 aa9.56□□□□□ -0.88
CCDC171-201ENST00000380701 CFDP1Q9UEE9 299 aaPredicted RBP9.55□□□□□ -0.88
CCDC171-201ENST00000380701 HAP1P54257 671 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 943.5 ms