Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
HMGA1P17096 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.82□□□□□ -1.32
HMGA1P17096 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
HMGA1P17096 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 MIR188-201ENST00000385034 86 ntBASIC6.82□□□□□ -1.32
HMGA1P17096 RBBP4P5-201ENST00000398583 1266 ntBASIC6.82□□□□□ -1.32
HMGA1P17096 MIR541-201ENST00000401360 84 ntBASIC6.82□□□□□ -1.32
HMGA1P17096 RNA5SP431-201ENST00000410312 120 ntBASIC6.82□□□□□ -1.32
HMGA1P17096 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGA1P17096 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGA1P17096 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGA1P17096 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGA1P17096 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 AC106800.2-201ENST00000514009 1103 ntBASIC6.82□□□□□ -1.32
HMGA1P17096 RNA5SP441-201ENST00000516809 88 ntBASIC6.82□□□□□ -1.32
HMGA1P17096 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGA1P17096 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.82□□□□□ -1.32
HMGA1P17096 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.82□□□□□ -1.32
HMGA1P17096 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGA1P17096 AC005363.1-201ENST00000530779 351 ntBASIC6.82□□□□□ -1.32
HMGA1P17096 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGA1P17096 AC026826.3-201ENST00000561747 158 ntBASIC6.82□□□□□ -1.32
HMGA1P17096 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGA1P17096 AC005632.2-201ENST00000564271 828 ntBASIC6.82□□□□□ -1.32
HMGA1P17096 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGA1P17096 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
HMGA1P17096 RN7SL475P-201ENST00000583379 298 ntBASIC6.82□□□□□ -1.32
HMGA1P17096 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
HMGA1P17096 SMIM12P1-201ENST00000603004 274 ntBASIC6.82□□□□□ -1.32
HMGA1P17096 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGA1P17096 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGA1P17096 MIR6085-201ENST00000618314 110 ntBASIC6.82□□□□□ -1.32
HMGA1P17096 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.82□□□□□ -1.32
HMGA1P17096 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
HMGA1P17096 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
HMGA1P17096 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGA1P17096 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.82□□□□□ -1.32
HMGA1P17096 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGA1P17096 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGA1P17096 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
HMGA1P17096 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.81□□□□□ -1.32
HMGA1P17096 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.81□□□□□ -1.32
HMGA1P17096 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
HMGA1P17096 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 DHFRP2-201ENST00000414224 547 ntBASIC6.81□□□□□ -1.32
HMGA1P17096 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HMGA1P17096 RPL23AP85-201ENST00000421838 433 ntBASIC6.81□□□□□ -1.32
HMGA1P17096 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
HMGA1P17096 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.81□□□□□ -1.32
HMGA1P17096 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
HMGA1P17096 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 AC011853.1-201ENST00000518911 454 ntBASIC6.81□□□□□ -1.32
HMGA1P17096 CYCSP25-201ENST00000525280 316 ntBASIC6.81□□□□□ -1.32
HMGA1P17096 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HMGA1P17096 AC084121.1-201ENST00000533882 835 ntBASIC6.81□□□□□ -1.32
HMGA1P17096 AC023968.1-201ENST00000560719 475 ntBASIC6.81□□□□□ -1.32
HMGA1P17096 AC004232.2-201ENST00000574245 821 ntBASIC6.81□□□□□ -1.32
HMGA1P17096 AL589863.1-201ENST00000595383 631 ntBASIC6.81□□□□□ -1.32
HMGA1P17096 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.81□□□□□ -1.32
HMGA1P17096 BUB1P1-201ENST00000603541 607 ntBASIC6.81□□□□□ -1.32
HMGA1P17096 AC073046.2-201ENST00000604756 527 ntBASIC6.81□□□□□ -1.32
HMGA1P17096 AC005393.1-201ENST00000617916 584 ntBASIC6.81□□□□□ -1.32
HMGA1P17096 MIR8089-201ENST00000620165 82 ntBASIC6.81□□□□□ -1.32
HMGA1P17096 AC073592.6-201ENST00000624271 415 ntBASIC6.81□□□□□ -1.32
HMGA1P17096 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.81□□□□□ -1.32
HMGA1P17096 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.81□□□□□ -1.32
HMGA1P17096 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.81□□□□□ -1.32
HMGA1P17096 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HMGA1P17096 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
HMGA1P17096 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMGA1P17096 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMGA1P17096 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.8□□□□□ -1.32
HMGA1P17096 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMGA1P17096 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HMGA1P17096 CASC19-246ENST00000641625 1606 ntBASIC6.8□□□□□ -1.32
HMGA1P17096 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.8□□□□□ -1.32
HMGA1P17096 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HMGA1P17096 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms