RNA–Protein interactions for RNA: ENST00000523953.5

CA1-222, Transcript of carbonic anhydrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CA1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA1-222ENST00000523953 AEBP2Q6ZN18 517 aaPredicted RBP15.87■□□□□ 0.13
CA1-222ENST00000523953 CHIC1Q5VXU3 224 aa15.38■□□□□ 0.05
CA1-222ENST00000523953 NISCHQ9Y2I1 1504 aa14.69□□□□□ -0.06
CA1-222ENST00000523953 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
CA1-222ENST00000523953 SENP3Q9H4L4 574 aaPredicted RBP13.25□□□□□ -0.29
CA1-222ENST00000523953 CCDC180Q9P1Z9 1646 aa12.68□□□□□ -0.38
CA1-222ENST00000523953 PLPPR3Q6T4P5 718 aa12.45□□□□□ -0.42
CA1-222ENST00000523953 ZCCHC6Q5VYS8 1495 aaKnown RBP12.45□□□□□ -0.42
CA1-222ENST00000523953 FOXD1Q16676 465 aa12.43□□□□□ -0.42
CA1-222ENST00000523953 DCAF1Q9Y4B6 1507 aa12.23□□□□□ -0.45
CA1-222ENST00000523953 SHROOM4Q9ULL8 1493 aa12.1□□□□□ -0.47
CA1-222ENST00000523953 PPP6R1Q9UPN7 881 aa12.09□□□□□ -0.47
CA1-222ENST00000523953 ADRA2BP18089 450 aa12.05□□□□□ -0.48
CA1-222ENST00000523953 MYO15BQ96JP2 1530 aa11.94□□□□□ -0.5
CA1-222ENST00000523953 SUPT5HO00267 1087 aaKnown RBP11.83□□□□□ -0.52
CA1-222ENST00000523953 DCAF8L2P0C7V8 631 aa11.76□□□□□ -0.53
CA1-222ENST00000523953 ABCC9O60706 1549 aa11.75□□□□□ -0.53
CA1-222ENST00000523953 PIAS4Q8N2W9 510 aaPredicted RBP11.71□□□□□ -0.53
CA1-222ENST00000523953 NACADO15069 1562 aa11.69□□□□□ -0.54
CA1-222ENST00000523953 SCRIBQ14160 1630 aa11.61□□□□□ -0.55
CA1-222ENST00000523953 RSF1Q96T23 1441 aaPredicted RBP11.53□□□□□ -0.56
CA1-222ENST00000523953 RB1CC1Q8TDY2 1594 aa11.48□□□□□ -0.57
CA1-222ENST00000523953 MROH2BQ7Z745 1585 aa11.34□□□□□ -0.59
CA1-222ENST00000523953 CECR2Q9BXF3 1484 aa11.33□□□□□ -0.6
CA1-222ENST00000523953 BAZ1AQ9NRL2 1556 aaPredicted RBP11.32□□□□□ -0.6
CA1-222ENST00000523953 MSH5O43196 834 aa11.27□□□□□ -0.61
CA1-222ENST00000523953 WIZO95785 1651 aa11.26□□□□□ -0.61
CA1-222ENST00000523953 UNC13AQ9UPW8 1703 aa11.25□□□□□ -0.61
CA1-222ENST00000523953 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
CA1-222ENST00000523953 SMARCA4P51532 1647 aa11.21□□□□□ -0.61
CA1-222ENST00000523953 TOP2AP11388 1531 aaKnown RBP11.21□□□□□ -0.62
CA1-222ENST00000523953 HRCP23327 699 aa11.16□□□□□ -0.62
CA1-222ENST00000523953 TRIM41Q8WV44 630 aa11.15□□□□□ -0.63
CA1-222ENST00000523953 LOC105371045A0A1W2PR82 267 aa11.13□□□□□ -0.63
CA1-222ENST00000523953 BICRAQ9NZM4 1560 aa11.12□□□□□ -0.63
CA1-222ENST00000523953 PEG3Q9GZU2 1588 aa11.12□□□□□ -0.63
CA1-222ENST00000523953 SMARCA2P51531 1590 aa11.1□□□□□ -0.63
CA1-222ENST00000523953 CCDC88BA6NC98 1476 aa11.05□□□□□ -0.64
CA1-222ENST00000523953 PCGF6Q9BYE7 350 aa11.05□□□□□ -0.64
CA1-222ENST00000523953 PPP4R3CPQ6ZMV5 832 aa11.04□□□□□ -0.64
CA1-222ENST00000523953 TRIM26Q12899 539 aaPredicted RBP11.03□□□□□ -0.64
CA1-222ENST00000523953 MAPK8IP2Q13387 824 aaPredicted RBP10.96□□□□□ -0.65
CA1-222ENST00000523953 EEA1Q15075 1411 aa10.95□□□□□ -0.66
CA1-222ENST00000523953 KCNA4P22459 653 aa10.94□□□□□ -0.66
CA1-222ENST00000523953 ABCC8Q09428 1581 aa10.92□□□□□ -0.66
CA1-222ENST00000523953 ATAD2BQ9ULI0 1458 aa10.91□□□□□ -0.66
CA1-222ENST00000523953 FAM9AQ8IZU1 332 aaPredicted RBP10.88□□□□□ -0.67
CA1-222ENST00000523953 WRNQ14191 1432 aaPredicted RBP eCLIP10.87□□□□□ -0.67
CA1-222ENST00000523953 BAZ1BQ9UIG0 1483 aaKnown RBP10.85□□□□□ -0.67
CA1-222ENST00000523953 ZEB1P37275 1124 aaPredicted RBP10.84□□□□□ -0.67
CA1-222ENST00000523953 PABPN1Q86U42 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
CA1-222ENST00000523953 TNIKQ9UKE5 1360 aa10.82□□□□□ -0.68
CA1-222ENST00000523953 HMGXB3Q12766 1538 aa10.82□□□□□ -0.68
CA1-222ENST00000523953 SOGA1O94964 1423 aa10.8□□□□□ -0.68
CA1-222ENST00000523953 KIF21BO75037 1637 aa10.79□□□□□ -0.68
CA1-222ENST00000523953 SYNJ1O43426 1573 aa10.79□□□□□ -0.68
CA1-222ENST00000523953 GOLGA3Q08378 1498 aa10.77□□□□□ -0.68
CA1-222ENST00000523953 NCAPD3P42695 1498 aa10.77□□□□□ -0.69
CA1-222ENST00000523953 CEP162Q5TB80 1403 aa10.77□□□□□ -0.69
CA1-222ENST00000523953 SCAF1Q9H7N4 1312 aaKnown RBP10.75□□□□□ -0.69
CA1-222ENST00000523953 CSRNP3Q8WYN3 585 aa10.75□□□□□ -0.69
CA1-222ENST00000523953 BIVM-ERCC5R4GMW8 1640 aa10.75□□□□□ -0.69
CA1-222ENST00000523953 TOP2BQ02880 1626 aa10.74□□□□□ -0.69
CA1-222ENST00000523953 CEP164Q9UPV0 1460 aa10.74□□□□□ -0.69
CA1-222ENST00000523953 PPARGC1BQ86YN6 1023 aaKnown RBP10.72□□□□□ -0.69
CA1-222ENST00000523953 RUSC2Q8N2Y8 1516 aa10.72□□□□□ -0.69
CA1-222ENST00000523953 PRDM2Q13029 1718 aa10.66□□□□□ -0.7
CA1-222ENST00000523953 CNKSR2Q8WXI2 1034 aa10.65□□□□□ -0.7
CA1-222ENST00000523953 ERICH3Q5RHP9 1530 aa10.65□□□□□ -0.7
CA1-222ENST00000523953 NPM3O75607 178 aaKnown RBP10.65□□□□□ -0.71
CA1-222ENST00000523953 CFTRP13569 1480 aa10.64□□□□□ -0.71
CA1-222ENST00000523953 EHMT2Q96KQ7 1210 aa10.63□□□□□ -0.71
CA1-222ENST00000523953 NCBP3Q53F19 620 aaKnown RBP10.62□□□□□ -0.71
CA1-222ENST00000523953 DMRT2Q9Y5R5 561 aa10.61□□□□□ -0.71
CA1-222ENST00000523953 PRXQ9BXM0 1461 aa10.59□□□□□ -0.71
CA1-222ENST00000523953 VPS8Q8N3P4 1428 aa10.59□□□□□ -0.71
CA1-222ENST00000523953 CUX1P39880 1505 aa10.58□□□□□ -0.72
CA1-222ENST00000523953 CLIP1P30622 1438 aa10.58□□□□□ -0.72
CA1-222ENST00000523953 UBTFP17480 764 aaKnown RBP10.58□□□□□ -0.72
CA1-222ENST00000523953 RAPGEF2Q9Y4G8 1499 aa10.58□□□□□ -0.72
CA1-222ENST00000523953 KIF27Q86VH2 1401 aa10.52□□□□□ -0.73
CA1-222ENST00000523953 CADPSQ9ULU8 1353 aa10.48□□□□□ -0.73
CA1-222ENST00000523953 ARAP1Q96P48 1450 aa10.47□□□□□ -0.73
CA1-222ENST00000523953 CCER1Q8TC90 406 aaPredicted RBP10.46□□□□□ -0.73
CA1-222ENST00000523953 CC2D2AQ9P2K1 1620 aa10.45□□□□□ -0.74
CA1-222ENST00000523953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.44□□□□□ -0.74
CA1-222ENST00000523953 RNF216Q9NWF9 866 aaPredicted RBP10.43□□□□□ -0.74
CA1-222ENST00000523953 MAP3K1Q13233 1512 aa10.4□□□□□ -0.74
CA1-222ENST00000523953 HOXD11P31277 338 aaPredicted RBP10.39□□□□□ -0.75
CA1-222ENST00000523953 DNMBPQ6XZF7 1577 aa10.39□□□□□ -0.75
CA1-222ENST00000523953 FGD5Q6ZNL6 1462 aa10.39□□□□□ -0.75
CA1-222ENST00000523953 APLP2Q06481 763 aa10.38□□□□□ -0.75
CA1-222ENST00000523953 ARHGAP35Q9NRY4 1499 aa10.38□□□□□ -0.75
CA1-222ENST00000523953 IGF1RP08069 1367 aa10.37□□□□□ -0.75
CA1-222ENST00000523953 CUX2O14529 1486 aa10.37□□□□□ -0.75
CA1-222ENST00000523953 FANCD2Q9BXW9 1451 aa10.36□□□□□ -0.75
CA1-222ENST00000523953 RRBP1Q9P2E9 1410 aaKnown RBP10.36□□□□□ -0.75
CA1-222ENST00000523953 POTEDQ86YR6 584 aa10.36□□□□□ -0.75
CA1-222ENST00000523953 ABCA10Q8WWZ4 1543 aa10.34□□□□□ -0.75
CA1-222ENST00000523953 CLSPNQ9HAW4 1339 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms