Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 ACTP1-201ENST00000440793 383 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 RPL31P20-201ENST00000449593 360 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 AL133387.3-201ENST00000450669 522 ntTSL 5 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 RPL7L1P3-201ENST00000455249 689 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 GTF2IP12-201ENST00000456547 356 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 RPSAP24-201ENST00000461543 873 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC072039.1-201ENST00000477611 581 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 RPL12P7-201ENST00000493832 494 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC008629.3-201ENST00000505786 586 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 MRPL49P1-201ENST00000505951 535 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 PRPS1L1-201ENST00000506618 1090 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC034207.1-201ENST00000506742 948 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC096661.1-201ENST00000515870 822 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 RNU6-264P-201ENST00000517134 104 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 RNA5SP159-201ENST00000517161 103 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC020688.1-201ENST00000519282 1248 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 HPRT1P3-201ENST00000539521 576 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC005779.1-201ENST00000591569 540 ntTSL 3 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 RN7SL840P-201ENST00000606883 284 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 uc_338.30-201ENST00000612038 168 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC023158.2-201ENST00000614876 543 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 AL445264.1-201ENST00000621719 171 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC011389.3-201ENST00000623273 999 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 LINC00710-219ENST00000635054 938 ntTSL 5 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC247036.7-201ENST00000639643 304 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AL132796.2-201ENST00000554025 1851 ntTSL 5 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC026887.1-201ENST00000624657 2985 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 CCDC174-202ENST00000383794 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 CPNE4-210ENST00000512332 2230 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 HS3ST5-202ENST00000411826 2744 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 HKR1-213ENST00000589392 2152 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 AC090241.3-201ENST00000621730 2599 ntBASIC9.16□□□□□ -0.94
LRCH3Q96II8 DMD-212ENST00000378723 4645 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LRCH3Q96II8 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC9.16□□□□□ -0.94
LRCH3Q96II8 ADAMTS9-AS1-206ENST00000493124 1511 ntTSL 5 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 ADGRG1-202ENST00000456916 3860 ntTSL 2 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 COMMD3-BMI1-205ENST00000602390 1419 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 CASC19-206ENST00000641028 1430 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 GABRA1-219ENST00000638112 2818 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
LRCH3Q96II8 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LRCH3Q96II8 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
LRCH3Q96II8 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
LRCH3Q96II8 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
LRCH3Q96II8 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 OR5M9-201ENST00000279791 933 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LRCH3Q96II8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LRCH3Q96II8 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
LRCH3Q96II8 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 RANP6-201ENST00000413691 644 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 RPL3P4-201ENST00000417615 423 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 PNRC2P1-201ENST00000423940 420 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 ELOCP14-201ENST00000428070 331 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 AL591212.2-201ENST00000433923 257 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
LRCH3Q96II8 ELOCP7-201ENST00000439968 331 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 OR51B8P-201ENST00000449892 769 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 BX842559.2-201ENST00000451418 605 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 RN7SL228P-201ENST00000470060 303 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
LRCH3Q96II8 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 RN7SKP14-201ENST00000516000 329 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 IGHVIII-38-1-201ENST00000521454 282 ntBASIC9.15□□□□□ -0.94
LRCH3Q96II8 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC9.15□□□□□ -0.94
LRCH3Q96II8 NATP-201ENST00000523491 878 ntBASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms