RNA–Protein interactions for RNA: ENST00000514384.1

SMIM20-202, Transcript of small integral membrane protein 20, humanhuman

TSL 5 BASIC

Gene SMIM20, Length 774 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-202ENST00000514384 AEBP2Q6ZN18 517 aaPredicted RBP21.39■■□□□ 1.01
SMIM20-202ENST00000514384 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
SMIM20-202ENST00000514384 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
SMIM20-202ENST00000514384 PHF23Q9BUL5 403 aaPredicted RBP18.2■□□□□ 0.5
SMIM20-202ENST00000514384 FOXD1Q16676 465 aa17.09■□□□□ 0.33
SMIM20-202ENST00000514384 NISCHQ9Y2I1 1504 aa16.81■□□□□ 0.28
SMIM20-202ENST00000514384 ABCC9O60706 1549 aa16.67■□□□□ 0.26
SMIM20-202ENST00000514384 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
SMIM20-202ENST00000514384 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
SMIM20-202ENST00000514384 MSH5O43196 834 aa16.2■□□□□ 0.18
SMIM20-202ENST00000514384 PIAS4Q8N2W9 510 aaPredicted RBP16.12■□□□□ 0.17
SMIM20-202ENST00000514384 ADRA2BP18089 450 aa15.95■□□□□ 0.14
SMIM20-202ENST00000514384 DNAJC5Q9H3Z4 198 aa15.93■□□□□ 0.14
SMIM20-202ENST00000514384 PPP6R1Q9UPN7 881 aa15.9■□□□□ 0.14
SMIM20-202ENST00000514384 POTEDQ86YR6 584 aa15.6■□□□□ 0.09
SMIM20-202ENST00000514384 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
SMIM20-202ENST00000514384 CCDC180Q9P1Z9 1646 aa15.4■□□□□ 0.06
SMIM20-202ENST00000514384 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
SMIM20-202ENST00000514384 CECR2Q9BXF3 1484 aa15.08■□□□□ 0
SMIM20-202ENST00000514384 TRIM41Q8WV44 630 aa14.94□□□□□ -0.02
SMIM20-202ENST00000514384 CC2D2AQ9P2K1 1620 aa14.92□□□□□ -0.02
SMIM20-202ENST00000514384 SCAF1Q9H7N4 1312 aaKnown RBP14.91□□□□□ -0.02
SMIM20-202ENST00000514384 BICRAQ9NZM4 1560 aa14.9□□□□□ -0.02
SMIM20-202ENST00000514384 UNC13AQ9UPW8 1703 aa14.88□□□□□ -0.03
SMIM20-202ENST00000514384 DCAF8L2P0C7V8 631 aa14.86□□□□□ -0.03
SMIM20-202ENST00000514384 NACADO15069 1562 aa14.85□□□□□ -0.03
SMIM20-202ENST00000514384 CUX2O14529 1486 aa14.63□□□□□ -0.07
SMIM20-202ENST00000514384 EIF4G1Q04637 1599 aaKnown RBP14.61□□□□□ -0.07
SMIM20-202ENST00000514384 DMRT2Q9Y5R5 561 aa14.61□□□□□ -0.07
SMIM20-202ENST00000514384 MAPK8IP2Q13387 824 aaPredicted RBP14.6□□□□□ -0.07
SMIM20-202ENST00000514384 ERCC6Q03468 1493 aa14.41□□□□□ -0.1
SMIM20-202ENST00000514384 SHROOM4Q9ULL8 1493 aa14.4□□□□□ -0.1
SMIM20-202ENST00000514384 PPP4R3CPQ6ZMV5 832 aa14.4□□□□□ -0.1
SMIM20-202ENST00000514384 MYO15BQ96JP2 1530 aa14.23□□□□□ -0.13
SMIM20-202ENST00000514384 DCAF8L1A6NGE4 600 aa14.2□□□□□ -0.14
SMIM20-202ENST00000514384 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
SMIM20-202ENST00000514384 SCRIBQ14160 1630 aa14.18□□□□□ -0.14
SMIM20-202ENST00000514384 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
SMIM20-202ENST00000514384 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
SMIM20-202ENST00000514384 NESP48681 1621 aa14.04□□□□□ -0.16
SMIM20-202ENST00000514384 RNF216Q9NWF9 866 aaPredicted RBP14.02□□□□□ -0.17
SMIM20-202ENST00000514384 THOC2Q8NI27 1593 aaKnown RBP13.97□□□□□ -0.17
SMIM20-202ENST00000514384 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
SMIM20-202ENST00000514384 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
SMIM20-202ENST00000514384 ILDR1Q86SU0 546 aaPredicted RBP13.9□□□□□ -0.18
SMIM20-202ENST00000514384 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
SMIM20-202ENST00000514384 SMARCA2P51531 1590 aa13.88□□□□□ -0.19
SMIM20-202ENST00000514384 BAZ1AQ9NRL2 1556 aaPredicted RBP13.82□□□□□ -0.2
SMIM20-202ENST00000514384 RIMBP3CA6NJZ7 1639 aa13.8□□□□□ -0.2
SMIM20-202ENST00000514384 RIMBP3BA6NNM3 1639 aa13.8□□□□□ -0.2
SMIM20-202ENST00000514384 RIMBP3Q9UFD9 1639 aa13.8□□□□□ -0.2
SMIM20-202ENST00000514384 NCAPD3P42695 1498 aa13.78□□□□□ -0.2
SMIM20-202ENST00000514384 CYB5RLQ6IPT4 315 aa13.73□□□□□ -0.21
SMIM20-202ENST00000514384 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
SMIM20-202ENST00000514384 ZCCHC6Q5VYS8 1495 aaKnown RBP13.7□□□□□ -0.22
SMIM20-202ENST00000514384 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
SMIM20-202ENST00000514384 RNF39Q9H2S5 420 aa13.68□□□□□ -0.22
SMIM20-202ENST00000514384 ARHGEF11O15085 1522 aa13.66□□□□□ -0.22
SMIM20-202ENST00000514384 ATAD2BQ9ULI0 1458 aa13.64□□□□□ -0.23
SMIM20-202ENST00000514384 NPM3O75607 178 aaKnown RBP13.6□□□□□ -0.23
SMIM20-202ENST00000514384 C1QBPQ07021 282 aaKnown RBP13.6□□□□□ -0.23
SMIM20-202ENST00000514384 PDS5BQ9NTI5 1447 aa13.6□□□□□ -0.23
SMIM20-202ENST00000514384 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.23
SMIM20-202ENST00000514384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMIM20-202ENST00000514384 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
SMIM20-202ENST00000514384 WDR62O43379 1518 aa13.54□□□□□ -0.24
SMIM20-202ENST00000514384 HMGXB3Q12766 1538 aa13.53□□□□□ -0.24
SMIM20-202ENST00000514384 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
SMIM20-202ENST00000514384 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
SMIM20-202ENST00000514384 CADPSQ9ULU8 1353 aa13.35□□□□□ -0.27
SMIM20-202ENST00000514384 KCNA4P22459 653 aa13.33□□□□□ -0.28
SMIM20-202ENST00000514384 SMARCA4P51532 1647 aa13.31□□□□□ -0.28
SMIM20-202ENST00000514384 CEP164Q9UPV0 1460 aa13.29□□□□□ -0.28
SMIM20-202ENST00000514384 ZNF608Q9ULD9 1512 aaPredicted RBP13.25□□□□□ -0.29
SMIM20-202ENST00000514384 KDM4FA0A1W2PPD8 638 aa13.22□□□□□ -0.29
SMIM20-202ENST00000514384 FANCD2Q9BXW9 1451 aa13.22□□□□□ -0.29
SMIM20-202ENST00000514384 URB2Q14146 1524 aaKnown RBP13.19□□□□□ -0.3
SMIM20-202ENST00000514384 FBLN2P98095 1184 aa13.18□□□□□ -0.3
SMIM20-202ENST00000514384 RSF1Q96T23 1441 aaPredicted RBP13.17□□□□□ -0.3
SMIM20-202ENST00000514384 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
SMIM20-202ENST00000514384 CHD1O14646 1710 aa13.11□□□□□ -0.31
SMIM20-202ENST00000514384 APLP2Q06481 763 aa13.1□□□□□ -0.31
SMIM20-202ENST00000514384 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
SMIM20-202ENST00000514384 LMTK3Q96Q04 1460 aa13.07□□□□□ -0.32
SMIM20-202ENST00000514384 CAPN15O75808 1086 aa13.06□□□□□ -0.32
SMIM20-202ENST00000514384 IFT140Q96RY7 1462 aa13.05□□□□□ -0.32
SMIM20-202ENST00000514384 FBXO41Q8TF61 875 aa13.05□□□□□ -0.32
SMIM20-202ENST00000514384 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
SMIM20-202ENST00000514384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
SMIM20-202ENST00000514384 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
SMIM20-202ENST00000514384 MROH2BQ7Z745 1585 aa13.01□□□□□ -0.33
SMIM20-202ENST00000514384 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.33
SMIM20-202ENST00000514384 ILDR2Q71H61 639 aa13□□□□□ -0.33
SMIM20-202ENST00000514384 SOCS7O14512 581 aa12.99□□□□□ -0.33
SMIM20-202ENST00000514384 CFTRP13569 1480 aa12.96□□□□□ -0.34
SMIM20-202ENST00000514384 ERCC6L2Q5T890 1561 aa12.94□□□□□ -0.34
SMIM20-202ENST00000514384 HECW2Q9P2P5 1572 aa12.94□□□□□ -0.34
SMIM20-202ENST00000514384 CLASP1Q7Z460 1538 aa12.94□□□□□ -0.34
SMIM20-202ENST00000514384 GAPVD1Q14C86 1478 aa12.94□□□□□ -0.34
SMIM20-202ENST00000514384 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms