Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 ATP5G1P1-201ENST00000448724 379 ntBASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 B3GAT3P1-201ENST00000471720 806 ntBASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 DGCR10-201ENST00000609839 495 ntBASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.89■□□□□ 0.93
HCFC2Q9Y5Z7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 TSPY14P-201ENST00000303979 915 ntBASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 ECEL1P2-202ENST00000465689 757 ntBASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 EGLN1P1-201ENST00000531623 762 ntBASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HCFC2Q9Y5Z7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.87■□□□□ 0.93
HCFC2Q9Y5Z7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HCFC2Q9Y5Z7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HCFC2Q9Y5Z7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HCFC2Q9Y5Z7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HCFC2Q9Y5Z7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HCFC2Q9Y5Z7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HCFC2Q9Y5Z7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HCFC2Q9Y5Z7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.87■□□□□ 0.93
HCFC2Q9Y5Z7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HCFC2Q9Y5Z7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
HCFC2Q9Y5Z7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.87■□□□□ 0.93
HCFC2Q9Y5Z7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.87■□□□□ 0.93
HCFC2Q9Y5Z7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HCFC2Q9Y5Z7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HCFC2Q9Y5Z7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HCFC2Q9Y5Z7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.86■□□□□ 0.93
HCFC2Q9Y5Z7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HCFC2Q9Y5Z7 AC011506.1-201ENST00000474329 610 ntBASIC20.86■□□□□ 0.93
HCFC2Q9Y5Z7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.86■□□□□ 0.93
HCFC2Q9Y5Z7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.86■□□□□ 0.93
HCFC2Q9Y5Z7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.86■□□□□ 0.93
HCFC2Q9Y5Z7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HCFC2Q9Y5Z7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HCFC2Q9Y5Z7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.86■□□□□ 0.93
HCFC2Q9Y5Z7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 AC004980.1-204ENST00000429707 299 ntBASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HCFC2Q9Y5Z7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 AF106564.1-201ENST00000607058 2553 ntBASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 CRYGFP-201ENST00000418459 633 ntBASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 AC097488.1-201ENST00000507834 756 ntBASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 AC116351.2-201ENST00000606540 1585 ntBASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HCFC2Q9Y5Z7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms