Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 AC009053.2-201ENST00000563701 2365 ntBASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.25□□□□□ -0.13
CHTOPQ9Y3Y2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.24□□□□□ -0.13
CHTOPQ9Y3Y2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 AC021242.3-201ENST00000607598 1377 ntBASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 PRORSD1P-202ENST00000563365 2154 ntBASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 RARRES2P2-201ENST00000394842 485 ntBASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 OR2I1P-207ENST00000453522 948 ntBASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 TMEM179-206ENST00000616017 1645 ntBASIC14.23□□□□□ -0.13
CHTOPQ9Y3Y2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CHTOPQ9Y3Y2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.22□□□□□ -0.13
CHTOPQ9Y3Y2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHTOPQ9Y3Y2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHTOPQ9Y3Y2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHTOPQ9Y3Y2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CHTOPQ9Y3Y2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHTOPQ9Y3Y2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHTOPQ9Y3Y2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHTOPQ9Y3Y2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHTOPQ9Y3Y2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms