Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LSM2Q9Y333 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LSM2Q9Y333 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LSM2Q9Y333 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.66■□□□□ 0.42
LSM2Q9Y333 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.66■□□□□ 0.42
LSM2Q9Y333 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 AC243732.1-201ENST00000612648 864 ntBASIC17.66■□□□□ 0.42
LSM2Q9Y333 AL358852.1-201ENST00000623174 1268 ntBASIC17.66■□□□□ 0.42
LSM2Q9Y333 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LSM2Q9Y333 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LSM2Q9Y333 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LSM2Q9Y333 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LSM2Q9Y333 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.66■□□□□ 0.42
LSM2Q9Y333 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM2Q9Y333 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM2Q9Y333 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM2Q9Y333 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM2Q9Y333 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.65■□□□□ 0.42
LSM2Q9Y333 PTBP1P-201ENST00000554374 1601 ntBASIC17.65■□□□□ 0.42
LSM2Q9Y333 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM2Q9Y333 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LSM2Q9Y333 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.65■□□□□ 0.42
LSM2Q9Y333 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.65■□□□□ 0.42
LSM2Q9Y333 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LSM2Q9Y333 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
LSM2Q9Y333 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM2Q9Y333 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM2Q9Y333 AL136116.3-201ENST00000402907 1138 ntBASIC17.65■□□□□ 0.42
LSM2Q9Y333 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.65■□□□□ 0.42
LSM2Q9Y333 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM2Q9Y333 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.65■□□□□ 0.42
LSM2Q9Y333 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.65■□□□□ 0.42
LSM2Q9Y333 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.65■□□□□ 0.42
LSM2Q9Y333 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM2Q9Y333 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM2Q9Y333 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM2Q9Y333 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM2Q9Y333 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM2Q9Y333 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM2Q9Y333 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.65■□□□□ 0.42
LSM2Q9Y333 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.65■□□□□ 0.42
LSM2Q9Y333 AC009113.1-201ENST00000570267 2443 ntBASIC17.64■□□□□ 0.42
LSM2Q9Y333 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LSM2Q9Y333 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
LSM2Q9Y333 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.64■□□□□ 0.41
LSM2Q9Y333 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
LSM2Q9Y333 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM2Q9Y333 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LSM2Q9Y333 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM2Q9Y333 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.64■□□□□ 0.41
LSM2Q9Y333 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM2Q9Y333 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.64■□□□□ 0.41
LSM2Q9Y333 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.64■□□□□ 0.41
LSM2Q9Y333 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM2Q9Y333 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM2Q9Y333 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.64■□□□□ 0.41
LSM2Q9Y333 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM2Q9Y333 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.64■□□□□ 0.41
LSM2Q9Y333 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.64■□□□□ 0.41
LSM2Q9Y333 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM2Q9Y333 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.64■□□□□ 0.41
LSM2Q9Y333 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM2Q9Y333 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM2Q9Y333 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM2Q9Y333 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.64■□□□□ 0.41
LSM2Q9Y333 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM2Q9Y333 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM2Q9Y333 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM2Q9Y333 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM2Q9Y333 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM2Q9Y333 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LSM2Q9Y333 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM2Q9Y333 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM2Q9Y333 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM2Q9Y333 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM2Q9Y333 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LSM2Q9Y333 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM2Q9Y333 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM2Q9Y333 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.63■□□□□ 0.41
LSM2Q9Y333 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM2Q9Y333 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.63■□□□□ 0.41
LSM2Q9Y333 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.63■□□□□ 0.41
LSM2Q9Y333 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.63■□□□□ 0.41
LSM2Q9Y333 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.63■□□□□ 0.41
LSM2Q9Y333 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms