Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
COMMD3Q9UBI1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 AC018470.1-201ENST00000624790 3129 ntBASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
COMMD3Q9UBI1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
COMMD3Q9UBI1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
COMMD3Q9UBI1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.46■□□□□ 0.38
COMMD3Q9UBI1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
COMMD3Q9UBI1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.46■□□□□ 0.38
COMMD3Q9UBI1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
COMMD3Q9UBI1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 FZD10-202ENST00000539839 3282 ntBASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 LTB4R2-202ENST00000528054 3092 ntBASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 AC053503.5-201ENST00000601508 636 ntBASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
COMMD3Q9UBI1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.44■□□□□ 0.38
COMMD3Q9UBI1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms