Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 RPPH1-201ENST00000516869 333 ntBASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 AL359736.2-201ENST00000621992 437 ntBASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
SPHK1Q9NYA1 AC099778.1-201ENST00000568593 1911 ntBASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 SLC25A24-204ENST00000569674 2357 ntBASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 AL121829.2-201ENST00000620908 328 ntBASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHK1Q9NYA1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.16■□□□□ 0.66
SPHK1Q9NYA1 LINC01521-201ENST00000504184 1943 ntBASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 AL121906.2-201ENST00000621597 723 ntBASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.15■□□□□ 0.66
SPHK1Q9NYA1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SPHK1Q9NYA1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.14■□□□□ 0.66
SPHK1Q9NYA1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SPHK1Q9NYA1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SPHK1Q9NYA1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.14■□□□□ 0.66
SPHK1Q9NYA1 AC112907.3-201ENST00000577781 2400 ntBASIC19.14■□□□□ 0.66
SPHK1Q9NYA1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.14■□□□□ 0.65
SPHK1Q9NYA1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms