Protein–RNA interactions for Protein: Q9NVH0

EXD2, Exonuclease 3'-5' domain-containing protein 2, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD2Q9NVH0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 AP000974.1-201ENST00000623909 2387 ntBASIC18.82■□□□□ 0.6
EXD2Q9NVH0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 AC100791.3-201ENST00000617619 330 ntBASIC18.82■□□□□ 0.6
EXD2Q9NVH0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
EXD2Q9NVH0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 RARRES2P4-201ENST00000514074 484 ntBASIC18.81■□□□□ 0.6
EXD2Q9NVH0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 AC231657.2-201ENST00000624556 255 ntBASIC18.81■□□□□ 0.6
EXD2Q9NVH0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
EXD2Q9NVH0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 AC004408.2-201ENST00000623613 2777 ntBASIC18.8■□□□□ 0.6
EXD2Q9NVH0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 MCRIP2P1-201ENST00000394346 511 ntBASIC18.8■□□□□ 0.6
EXD2Q9NVH0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 AC069236.1-201ENST00000604339 616 ntBASIC18.8■□□□□ 0.6
EXD2Q9NVH0 AC008694.1-202ENST00000636953 945 ntBASIC18.8■□□□□ 0.6
EXD2Q9NVH0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 AC068338.2-201ENST00000563278 1430 ntBASIC18.8■□□□□ 0.6
EXD2Q9NVH0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
EXD2Q9NVH0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 CNN2P6-201ENST00000439038 900 ntBASIC18.79■□□□□ 0.6
EXD2Q9NVH0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EXD2Q9NVH0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms