Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PDLIM7Q9NR12 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.37■■□□□ 1.17
PDLIM7Q9NR12 AC073508.3-201ENST00000619697 1419 ntBASIC22.37■■□□□ 1.17
PDLIM7Q9NR12 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM7Q9NR12 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM7Q9NR12 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM7Q9NR12 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM7Q9NR12 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM7Q9NR12 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM7Q9NR12 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.36■■□□□ 1.17
PDLIM7Q9NR12 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.36■■□□□ 1.17
PDLIM7Q9NR12 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.36■■□□□ 1.17
PDLIM7Q9NR12 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.36■■□□□ 1.17
PDLIM7Q9NR12 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM7Q9NR12 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.36■■□□□ 1.17
PDLIM7Q9NR12 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PDLIM7Q9NR12 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 AC023632.3-201ENST00000521633 145 ntBASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 NTF6B-201ENST00000591913 560 ntBASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PDLIM7Q9NR12 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 AL137013.1-201ENST00000432946 1228 ntBASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 WDR88-203ENST00000592765 651 ntTSL 5 BASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 CYP2D8P-201ENST00000433633 1490 ntBASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDLIM7Q9NR12 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDLIM7Q9NR12 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.33■■□□□ 1.17
PDLIM7Q9NR12 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDLIM7Q9NR12 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PDLIM7Q9NR12 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.33■■□□□ 1.17
PDLIM7Q9NR12 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.33■■□□□ 1.17
PDLIM7Q9NR12 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.33■■□□□ 1.17
PDLIM7Q9NR12 DUX4L26-201ENST00000489078 1255 ntBASIC22.33■■□□□ 1.17
PDLIM7Q9NR12 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.33■■□□□ 1.17
PDLIM7Q9NR12 NAPSB-206ENST00000562112 1266 ntBASIC22.33■■□□□ 1.17
PDLIM7Q9NR12 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PDLIM7Q9NR12 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.33■■□□□ 1.17
PDLIM7Q9NR12 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDLIM7Q9NR12 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PDLIM7Q9NR12 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDLIM7Q9NR12 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDLIM7Q9NR12 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.33■■□□□ 1.16
PDLIM7Q9NR12 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
PDLIM7Q9NR12 KRT18P22-201ENST00000402024 1347 ntBASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 AC124283.5-201ENST00000624661 1809 ntBASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 AL390955.1-201ENST00000428694 934 ntBASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 SLC25A3P1-201ENST00000443844 931 ntBASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 AC010947.1-201ENST00000623454 693 ntBASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM7Q9NR12 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.31■■□□□ 1.16
PDLIM7Q9NR12 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms