Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MED28Q9H204 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
MED28Q9H204 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MED28Q9H204 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.95■□□□□ 0.3
MED28Q9H204 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.95■□□□□ 0.3
MED28Q9H204 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MED28Q9H204 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.95■□□□□ 0.3
MED28Q9H204 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MED28Q9H204 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
MED28Q9H204 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MED28Q9H204 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MED28Q9H204 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.95■□□□□ 0.3
MED28Q9H204 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MED28Q9H204 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MED28Q9H204 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.95■□□□□ 0.3
MED28Q9H204 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MED28Q9H204 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MED28Q9H204 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MED28Q9H204 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MED28Q9H204 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.94■□□□□ 0.3
MED28Q9H204 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MED28Q9H204 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
MED28Q9H204 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.94■□□□□ 0.3
MED28Q9H204 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MED28Q9H204 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MED28Q9H204 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MED28Q9H204 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.94■□□□□ 0.3
MED28Q9H204 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MED28Q9H204 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MED28Q9H204 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.94■□□□□ 0.3
MED28Q9H204 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MED28Q9H204 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.94■□□□□ 0.3
MED28Q9H204 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.94■□□□□ 0.3
MED28Q9H204 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
MED28Q9H204 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MED28Q9H204 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.94■□□□□ 0.3
MED28Q9H204 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MED28Q9H204 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.94■□□□□ 0.3
MED28Q9H204 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MED28Q9H204 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.94■□□□□ 0.3
MED28Q9H204 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MED28Q9H204 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.94■□□□□ 0.3
MED28Q9H204 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.94■□□□□ 0.3
MED28Q9H204 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MED28Q9H204 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
MED28Q9H204 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MED28Q9H204 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MED28Q9H204 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.93■□□□□ 0.3
MED28Q9H204 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MED28Q9H204 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.93■□□□□ 0.3
MED28Q9H204 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.93■□□□□ 0.3
MED28Q9H204 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MED28Q9H204 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.93■□□□□ 0.3
MED28Q9H204 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.93■□□□□ 0.3
MED28Q9H204 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.93■□□□□ 0.3
MED28Q9H204 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MED28Q9H204 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.93■□□□□ 0.3
MED28Q9H204 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MED28Q9H204 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MED28Q9H204 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
MED28Q9H204 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MED28Q9H204 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MED28Q9H204 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MED28Q9H204 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MED28Q9H204 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.92■□□□□ 0.3
MED28Q9H204 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MED28Q9H204 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.92■□□□□ 0.3
MED28Q9H204 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MED28Q9H204 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.92■□□□□ 0.3
MED28Q9H204 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MED28Q9H204 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.92■□□□□ 0.3
MED28Q9H204 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.92■□□□□ 0.3
MED28Q9H204 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MED28Q9H204 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.92■□□□□ 0.3
MED28Q9H204 NOC2LP2-201ENST00000407594 1944 ntBASIC16.92■□□□□ 0.3
MED28Q9H204 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MED28Q9H204 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MED28Q9H204 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MED28Q9H204 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MED28Q9H204 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.91■□□□□ 0.3
MED28Q9H204 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MED28Q9H204 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.91■□□□□ 0.3
MED28Q9H204 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.91■□□□□ 0.3
MED28Q9H204 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms