Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SDHCQ99643 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.17■□□□□ 0.34
SDHCQ99643 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SDHCQ99643 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SDHCQ99643 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.16■□□□□ 0.34
SDHCQ99643 KRT8P36-201ENST00000489121 1440 ntBASIC17.16■□□□□ 0.34
SDHCQ99643 KRT8P33-201ENST00000508125 1423 ntBASIC17.16■□□□□ 0.34
SDHCQ99643 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.16■□□□□ 0.34
SDHCQ99643 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.16■□□□□ 0.34
SDHCQ99643 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.16■□□□□ 0.34
SDHCQ99643 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 AC010997.5-201ENST00000609182 354 ntBASIC17.16■□□□□ 0.34
SDHCQ99643 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.16■□□□□ 0.34
SDHCQ99643 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.16■□□□□ 0.34
SDHCQ99643 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.16■□□□□ 0.34
SDHCQ99643 RARRES2P11-201ENST00000635158 484 ntBASIC17.16■□□□□ 0.34
SDHCQ99643 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.16■□□□□ 0.34
SDHCQ99643 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.16■□□□□ 0.34
SDHCQ99643 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.16■□□□□ 0.34
SDHCQ99643 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SDHCQ99643 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SDHCQ99643 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SDHCQ99643 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SDHCQ99643 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.15■□□□□ 0.34
SDHCQ99643 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SDHCQ99643 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SDHCQ99643 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.15■□□□□ 0.34
SDHCQ99643 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.15■□□□□ 0.34
SDHCQ99643 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SDHCQ99643 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SDHCQ99643 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SDHCQ99643 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SDHCQ99643 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SDHCQ99643 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SDHCQ99643 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SDHCQ99643 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SDHCQ99643 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SDHCQ99643 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.14■□□□□ 0.34
SDHCQ99643 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
SDHCQ99643 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SDHCQ99643 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SDHCQ99643 AC009237.3-201ENST00000393279 1427 ntBASIC17.14■□□□□ 0.33
SDHCQ99643 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SDHCQ99643 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SDHCQ99643 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.14■□□□□ 0.33
SDHCQ99643 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SDHCQ99643 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SDHCQ99643 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SDHCQ99643 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SDHCQ99643 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.14■□□□□ 0.33
SDHCQ99643 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SDHCQ99643 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SDHCQ99643 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SDHCQ99643 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SDHCQ99643 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SDHCQ99643 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SDHCQ99643 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SDHCQ99643 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SDHCQ99643 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.14■□□□□ 0.33
SDHCQ99643 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.14■□□□□ 0.33
SDHCQ99643 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SDHCQ99643 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SDHCQ99643 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SDHCQ99643 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SDHCQ99643 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 YBX1P4-201ENST00000392794 808 ntBASIC17.13■□□□□ 0.33
SDHCQ99643 NTF6A-201ENST00000591175 560 ntBASIC17.13■□□□□ 0.33
SDHCQ99643 AC106820.2-201ENST00000563775 3264 ntBASIC17.13■□□□□ 0.33
SDHCQ99643 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SDHCQ99643 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SDHCQ99643 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SDHCQ99643 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.13■□□□□ 0.33
SDHCQ99643 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms