Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 MTDHP2-201ENST00000601468 714 ntBASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 AP000997.3-201ENST00000623333 2250 ntBASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAB3IPQ96QF0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 AC009113.1-201ENST00000570267 2443 ntBASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 MIR2861-201ENST00000636310 90 ntBASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB3IPQ96QF0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 AC104581.1-202ENST00000635932 2618 ntBASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 AC010525.1-201ENST00000585559 441 ntBASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB3IPQ96QF0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RAB3IPQ96QF0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB3IPQ96QF0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IPQ96QF0 FZD10-202ENST00000539839 3282 ntBASIC19.35■□□□□ 0.69
RAB3IPQ96QF0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RAB3IPQ96QF0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IPQ96QF0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IPQ96QF0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IPQ96QF0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB3IPQ96QF0 BX664725.1-201ENST00000438252 379 ntBASIC19.35■□□□□ 0.69
RAB3IPQ96QF0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms