Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NEK1Q96PY6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.55■■□□□ 1.36
NEK1Q96PY6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
NEK1Q96PY6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NEK1Q96PY6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NEK1Q96PY6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NEK1Q96PY6 AC069152.1-201ENST00000438030 544 ntBASIC23.55■■□□□ 1.36
NEK1Q96PY6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NEK1Q96PY6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.55■■□□□ 1.36
NEK1Q96PY6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.55■■□□□ 1.36
NEK1Q96PY6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.55■■□□□ 1.36
NEK1Q96PY6 AC083880.1-201ENST00000608266 535 ntBASIC23.55■■□□□ 1.36
NEK1Q96PY6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
NEK1Q96PY6 AC133041.1-202ENST00000642053 222 ntBASIC23.55■■□□□ 1.36
NEK1Q96PY6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.55■■□□□ 1.36
NEK1Q96PY6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NEK1Q96PY6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NEK1Q96PY6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NEK1Q96PY6 AC009237.14-201ENST00000609975 1594 ntBASIC23.55■■□□□ 1.36
NEK1Q96PY6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.55■■□□□ 1.36
NEK1Q96PY6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
NEK1Q96PY6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
NEK1Q96PY6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.55■■□□□ 1.36
NEK1Q96PY6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
NEK1Q96PY6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
NEK1Q96PY6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.54■■□□□ 1.36
NEK1Q96PY6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NEK1Q96PY6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
NEK1Q96PY6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.54■■□□□ 1.36
NEK1Q96PY6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.54■■□□□ 1.36
NEK1Q96PY6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NEK1Q96PY6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.54■■□□□ 1.36
NEK1Q96PY6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NEK1Q96PY6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NEK1Q96PY6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NEK1Q96PY6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.54■■□□□ 1.36
NEK1Q96PY6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
NEK1Q96PY6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
NEK1Q96PY6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NEK1Q96PY6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NEK1Q96PY6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
NEK1Q96PY6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NEK1Q96PY6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.53■■□□□ 1.36
NEK1Q96PY6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.53■■□□□ 1.36
NEK1Q96PY6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NEK1Q96PY6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.53■■□□□ 1.36
NEK1Q96PY6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
NEK1Q96PY6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
NEK1Q96PY6 PHGDH-210ENST00000641115 1638 ntBASIC23.53■■□□□ 1.36
NEK1Q96PY6 AL390719.1-204ENST00000412397 1219 ntBASIC23.53■■□□□ 1.36
NEK1Q96PY6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NEK1Q96PY6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.53■■□□□ 1.36
NEK1Q96PY6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
NEK1Q96PY6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
NEK1Q96PY6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NEK1Q96PY6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NEK1Q96PY6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.52■■□□□ 1.36
NEK1Q96PY6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NEK1Q96PY6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
NEK1Q96PY6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NEK1Q96PY6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
NEK1Q96PY6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NEK1Q96PY6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NEK1Q96PY6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.52■■□□□ 1.36
NEK1Q96PY6 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.52■■□□□ 1.36
NEK1Q96PY6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NEK1Q96PY6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.52■■□□□ 1.36
NEK1Q96PY6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NEK1Q96PY6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NEK1Q96PY6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NEK1Q96PY6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NEK1Q96PY6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.52■■□□□ 1.36
NEK1Q96PY6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NEK1Q96PY6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NEK1Q96PY6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
NEK1Q96PY6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NEK1Q96PY6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.51■■□□□ 1.35
NEK1Q96PY6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NEK1Q96PY6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NEK1Q96PY6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.51■■□□□ 1.35
NEK1Q96PY6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NEK1Q96PY6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
NEK1Q96PY6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
NEK1Q96PY6 AC006557.6-201ENST00000623071 864 ntBASIC23.51■■□□□ 1.35
NEK1Q96PY6 HLA-B-256ENST00000639848 1089 ntBASIC23.51■■□□□ 1.35
NEK1Q96PY6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NEK1Q96PY6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.51■■□□□ 1.35
NEK1Q96PY6 AP001271.2-201ENST00000624018 1556 ntBASIC23.51■■□□□ 1.35
NEK1Q96PY6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.51■■□□□ 1.35
NEK1Q96PY6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NEK1Q96PY6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
NEK1Q96PY6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.51■■□□□ 1.35
NEK1Q96PY6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.5■■□□□ 1.35
NEK1Q96PY6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NEK1Q96PY6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NEK1Q96PY6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NEK1Q96PY6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NEK1Q96PY6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NEK1Q96PY6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NEK1Q96PY6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms