Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC44A1Q8WWI5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 AL032819.2-201ENST00000624543 2162 ntBASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 KRT8P20-201ENST00000423953 1409 ntBASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC44A1Q8WWI5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 AC100791.3-201ENST00000617619 330 ntBASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 AC013268.1-206ENST00000638368 961 ntBASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 AC112229.1-201ENST00000639295 961 ntBASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC44A1Q8WWI5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SLC44A1Q8WWI5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
SLC44A1Q8WWI5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
SLC44A1Q8WWI5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 MCRIP2P1-201ENST00000394346 511 ntBASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC44A1Q8WWI5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC44A1Q8WWI5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC44A1Q8WWI5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC44A1Q8WWI5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC44A1Q8WWI5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC44A1Q8WWI5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SLC44A1Q8WWI5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC44A1Q8WWI5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms