Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 PTBP1P-201ENST00000554374 1601 ntBASIC21.1■□□□□ 0.97
TRIM58Q8NG06 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM58Q8NG06 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 AC142381.2-201ENST00000566120 298 ntBASIC21.09■□□□□ 0.97
TRIM58Q8NG06 TERF1P2-201ENST00000583350 1212 ntBASIC21.09■□□□□ 0.97
TRIM58Q8NG06 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM58Q8NG06 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.08■□□□□ 0.97
TRIM58Q8NG06 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.08■□□□□ 0.97
TRIM58Q8NG06 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM58Q8NG06 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM58Q8NG06 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM58Q8NG06 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM58Q8NG06 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM58Q8NG06 AC123595.1-201ENST00000440769 1046 ntBASIC21.08■□□□□ 0.97
TRIM58Q8NG06 KRT8P17-201ENST00000453110 1448 ntBASIC21.08■□□□□ 0.97
TRIM58Q8NG06 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
TRIM58Q8NG06 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM58Q8NG06 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.08■□□□□ 0.97
TRIM58Q8NG06 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.08■□□□□ 0.97
TRIM58Q8NG06 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM58Q8NG06 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM58Q8NG06 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM58Q8NG06 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM58Q8NG06 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM58Q8NG06 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.08■□□□□ 0.96
TRIM58Q8NG06 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM58Q8NG06 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM58Q8NG06 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM58Q8NG06 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM58Q8NG06 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM58Q8NG06 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM58Q8NG06 AP001271.2-201ENST00000624018 1556 ntBASIC21.07■□□□□ 0.96
TRIM58Q8NG06 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM58Q8NG06 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.07■□□□□ 0.96
TRIM58Q8NG06 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM58Q8NG06 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
TRIM58Q8NG06 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM58Q8NG06 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms