Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 AL390719.1-204ENST00000412397 1219 ntBASIC22.54■■□□□ 1.2
RETREG2Q8NC44 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 AC006557.6-201ENST00000623071 864 ntBASIC22.54■■□□□ 1.2
RETREG2Q8NC44 AL049637.2-201ENST00000641778 930 ntBASIC22.54■■□□□ 1.2
RETREG2Q8NC44 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RETREG2Q8NC44 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG2Q8NC44 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG2Q8NC44 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.53■■□□□ 1.2
RETREG2Q8NC44 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG2Q8NC44 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG2Q8NC44 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.53■■□□□ 1.2
RETREG2Q8NC44 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG2Q8NC44 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG2Q8NC44 AC005829.2-201ENST00000571422 1056 ntBASIC22.53■■□□□ 1.2
RETREG2Q8NC44 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
RETREG2Q8NC44 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.53■■□□□ 1.2
RETREG2Q8NC44 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG2Q8NC44 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RETREG2Q8NC44 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
RETREG2Q8NC44 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 KRASP1-201ENST00000407852 552 ntBASIC22.52■■□□□ 1.2
RETREG2Q8NC44 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RETREG2Q8NC44 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RETREG2Q8NC44 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RETREG2Q8NC44 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 KRT18P21-201ENST00000515767 1272 ntBASIC22.51■■□□□ 1.19
RETREG2Q8NC44 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 MIR4785-201ENST00000585005 73 ntBASIC22.51■■□□□ 1.19
RETREG2Q8NC44 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RETREG2Q8NC44 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG2Q8NC44 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG2Q8NC44 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RETREG2Q8NC44 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RETREG2Q8NC44 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RETREG2Q8NC44 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.5■■□□□ 1.19
RETREG2Q8NC44 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.5■■□□□ 1.19
RETREG2Q8NC44 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.5■■□□□ 1.19
RETREG2Q8NC44 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.5■■□□□ 1.19
RETREG2Q8NC44 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.5■■□□□ 1.19
RETREG2Q8NC44 AC010331.1-201ENST00000611423 582 ntBASIC22.5■■□□□ 1.19
RETREG2Q8NC44 MIR2861-201ENST00000636310 90 ntBASIC22.5■■□□□ 1.19
RETREG2Q8NC44 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms