Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PAF1Q8N7H5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PAF1Q8N7H5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.4■□□□□ 0.86
PAF1Q8N7H5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
PAF1Q8N7H5 AL390719.1-204ENST00000412397 1219 ntBASIC20.4■□□□□ 0.86
PAF1Q8N7H5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.4■□□□□ 0.86
PAF1Q8N7H5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PAF1Q8N7H5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.4■□□□□ 0.86
PAF1Q8N7H5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.4■□□□□ 0.86
PAF1Q8N7H5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.4■□□□□ 0.86
PAF1Q8N7H5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PAF1Q8N7H5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PAF1Q8N7H5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PAF1Q8N7H5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PAF1Q8N7H5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PAF1Q8N7H5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PAF1Q8N7H5 AC020763.4-201ENST00000623414 4170 ntBASIC20.39■□□□□ 0.86
PAF1Q8N7H5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.39■□□□□ 0.85
PAF1Q8N7H5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PAF1Q8N7H5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PAF1Q8N7H5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PAF1Q8N7H5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PAF1Q8N7H5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.39■□□□□ 0.85
PAF1Q8N7H5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.39■□□□□ 0.85
PAF1Q8N7H5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.39■□□□□ 0.85
PAF1Q8N7H5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.39■□□□□ 0.85
PAF1Q8N7H5 MYC-209ENST00000641252 345 ntBASIC20.39■□□□□ 0.85
PAF1Q8N7H5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PAF1Q8N7H5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PAF1Q8N7H5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
PAF1Q8N7H5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.39■□□□□ 0.85
PAF1Q8N7H5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 DPP3P2-201ENST00000416030 1696 ntBASIC20.38■□□□□ 0.85
PAF1Q8N7H5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.38■□□□□ 0.85
PAF1Q8N7H5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PAF1Q8N7H5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 AC060766.5-201ENST00000590539 871 ntBASIC20.36■□□□□ 0.85
PAF1Q8N7H5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.36■□□□□ 0.85
PAF1Q8N7H5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PAF1Q8N7H5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PAF1Q8N7H5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PAF1Q8N7H5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PAF1Q8N7H5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PAF1Q8N7H5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PAF1Q8N7H5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.35■□□□□ 0.85
PAF1Q8N7H5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PAF1Q8N7H5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms