Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC46.42■■■■■ 5.024e-8■□□□□ 9.7
PABPN1Q86U42 EMC9-206ENST00000560403 872 ntTSL 2 BASIC43.94■■■■■ 4.624e-8■□□□□ 9.7
PABPN1Q86U42 COX5B-202ENST00000464949 613 ntTSL 542.22■■■■■ 4.354e-8■□□□□ 9.7
PABPN1Q86U42 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC41.84■■■■■ 4.294e-8■□□□□ 9.7
PABPN1Q86U42 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC41.79■■■■■ 4.284e-8■□□□□ 9.7
PABPN1Q86U42 PHPT1-205ENST00000492540 1316 ntTSL 1 (best)40.49■■■■■ 4.074e-8■□□□□ 9.7
PABPN1Q86U42 STK25-223ENST00000470438 515 ntTSL 538.72■■■■□ 3.794e-8■□□□□ 9.7
PABPN1Q86U42 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.684e-8■□□□□ 9.7
PABPN1Q86U42 STK25-205ENST00000405883 1904 ntTSL 2 BASIC37.99■■■■□ 3.674e-8■□□□□ 9.7
PABPN1Q86U42 STK25-204ENST00000405585 1643 ntTSL 2 BASIC37.3■■■■□ 3.564e-8■□□□□ 9.7
PABPN1Q86U42 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC37.07■■■■□ 3.524e-8■□□□□ 9.7
PABPN1Q86U42 STK25-230ENST00000494699 797 ntTSL 235.79■■■■□ 3.324e-8■□□□□ 9.7
PABPN1Q86U42 STK25-222ENST00000465009 871 ntTSL 235.26■■■■□ 3.244e-8■□□□□ 9.7
PABPN1Q86U42 STK25-234ENST00000535007 2459 ntTSL 2 BASIC33.98■■■■□ 3.034e-8■□□□□ 9.7
PABPN1Q86U42 XAB2-203ENST00000596134 543 ntTSL 233.97■■■■□ 3.034e-8■□□□□ 9.7
PABPN1Q86U42 PPP1R16A-206ENST00000528430 807 ntTSL 233.61■■■□□ 2.974e-8■□□□□ 9.7
PABPN1Q86U42 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC33.1■■■□□ 2.894e-8■□□□□ 9.7
PABPN1Q86U42 STK25-225ENST00000478403 1123 ntTSL 531.85■■■□□ 2.694e-8■□□□□ 9.7
PABPN1Q86U42 EMC9-207ENST00000560600 771 ntTSL 531.18■■■□□ 2.584e-8■□□□□ 9.7
PABPN1Q86U42 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.474e-8■□□□□ 9.7
PABPN1Q86U42 XAB2-204ENST00000600230 749 ntTSL 330.07■■■□□ 2.44e-8■□□□□ 9.7
PABPN1Q86U42 PHPT1-204ENST00000463215 627 ntTSL 229.96■■■□□ 2.394e-8■□□□□ 9.7
PABPN1Q86U42 MTSS1-206ENST00000519168 1822 ntTSL 229.64■■■□□ 2.334e-8■□□□□ 9.7
PABPN1Q86U42 STK25-228ENST00000487962 2024 ntTSL 229.29■■■□□ 2.284e-8■□□□□ 9.7
PABPN1Q86U42 MTSS1-215ENST00000523587 1643 ntTSL 1 (best)28.87■■■□□ 2.214e-8■□□□□ 9.7
PABPN1Q86U42 PHPT1-203ENST00000462205 619 ntTSL 328.81■■■□□ 2.24e-8■□□□□ 9.7
PABPN1Q86U42 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.194e-8■□□□□ 9.7
PABPN1Q86U42 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.164e-8■□□□□ 9.7
PABPN1Q86U42 PHPT1-206ENST00000497413 618 ntTSL 227.87■■■□□ 2.054e-8■□□□□ 9.7
PABPN1Q86U42 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.834e-8■□□□□ 9.7
PABPN1Q86U42 COX5B-204ENST00000494306 738 ntTSL 226.1■■□□□ 1.774e-8■□□□□ 9.7
PABPN1Q86U42 STK25-235ENST00000543554 2556 ntTSL 2 BASIC25.51■■□□□ 1.674e-8■□□□□ 9.7
PABPN1Q86U42 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC23.96■■□□□ 1.434e-8■□□□□ 9.7
PABPN1Q86U42 PPP1R16A-203ENST00000526183 4311 ntTSL 222.48■■□□□ 1.194e-8■□□□□ 9.7
PABPN1Q86U42 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.114e-8■□□□□ 9.7
PABPN1Q86U42 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC21.36■■□□□ 1.014e-8■□□□□ 9.7
PABPN1Q86U42 COX5B-203ENST00000491989 611 ntTSL 320.39■□□□□ 0.854e-8■□□□□ 9.7
PABPN1Q86U42 EMC9-203ENST00000558045 565 nt19.12■□□□□ 0.654e-8■□□□□ 9.7
PABPN1Q86U42 MAST2-203ENST00000372009 4047 ntTSL 5 BASIC16.72■□□□□ 0.274e-8■□□□□ 9.7
PABPN1Q86U42 MTSS1-205ENST00000518547 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.264e-8■□□□□ 9.7
PABPN1Q86U42 MTSS1-210ENST00000520771 3548 ntTSL 215.7■□□□□ 0.14e-8■□□□□ 9.7
PABPN1Q86U42 MTSS1-202ENST00000378017 4458 ntTSL 1 (best) BASIC15.18■□□□□ 0.024e-8■□□□□ 9.7
PABPN1Q86U42 EMC9-205ENST00000559101 530 ntTSL 314.53□□□□□ -0.084e-8■□□□□ 9.7
PABPN1Q86U42 U2AF2-208ENST00000592874 849 ntTSL 535.78■■■■□ 3.322e-8■□□□□ 9.7
PABPN1Q86U42 KLC4-208ENST00000463168 502 ntTSL 331.33■■■□□ 2.612e-6■□□□□ 9.7
PABPN1Q86U42 PCYT2-209ENST00000572157 442 ntTSL 420.71■□□□□ 0.918e-12■□□□□ 9.7
PABPN1Q86U42 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.623e-6■□□□□ 9.7
PABPN1Q86U42 PCYT2-210ENST00000572473 575 ntTSL 542.31■■■■■ 4.364e-9■□□□□ 9.7
PABPN1Q86U42 TGFBI-209ENST00000509485 731 ntTSL 322.32■■□□□ 1.163e-7■□□□□ 9.7
PABPN1Q86U42 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.292e-7■□□□□ 9.6
PABPN1Q86U42 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC20.54■□□□□ 0.882e-7■□□□□ 9.6
PABPN1Q86U42 TCF25-211ENST00000563636 721 ntTSL 236.2■■■■□ 3.399e-10■□□□□ 9.6
PABPN1Q86U42 TCF25-205ENST00000562184 634 ntTSL 225.77■■□□□ 1.729e-10■□□□□ 9.6
PABPN1Q86U42 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC32.28■■■□□ 2.765e-11■□□□□ 9.6
PABPN1Q86U42 RAB17-209ENST00000466244 937 ntTSL 229.69■■■□□ 2.345e-11■□□□□ 9.6
PABPN1Q86U42 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC53.87■■■■■ 6.212e-6■□□□□ 9.6
PABPN1Q86U42 ARRDC1-208ENST00000475658 854 ntTSL 343.94■■■■■ 4.622e-6■□□□□ 9.6
PABPN1Q86U42 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC42.64■■■■■ 4.421e-7■□□□□ 9.6
PABPN1Q86U42 IPO4-204ENST00000558193 555 ntTSL 442.28■■■■■ 4.362e-6■□□□□ 9.6
PABPN1Q86U42 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC40.68■■■■■ 4.11e-7■□□□□ 9.6
PABPN1Q86U42 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC39.67■■■■□ 3.942e-6■□□□□ 9.6
PABPN1Q86U42 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC38.31■■■■□ 3.721e-7■□□□□ 9.6
PABPN1Q86U42 POMT1-210ENST00000441334 1168 ntTSL 538.29■■■■□ 3.722e-6■□□□□ 9.6
PABPN1Q86U42 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.611e-7■□□□□ 9.6
PABPN1Q86U42 DMAP1-208ENST00000446292 1066 ntTSL 336.4■■■■□ 3.422e-6■□□□□ 9.6
PABPN1Q86U42 ACAA1-203ENST00000411549 1944 ntTSL 1 (best)36■■■■□ 3.351e-7■□□□□ 9.6
PABPN1Q86U42 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC35.64■■■■□ 3.31e-7■□□□□ 9.6
PABPN1Q86U42 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.292e-6■□□□□ 9.6
PABPN1Q86U42 IPO4-212ENST00000560222 573 ntTSL 335.44■■■■□ 3.262e-6■□□□□ 9.6
PABPN1Q86U42 DMAP1-207ENST00000440641 909 ntTSL 332.7■■■□□ 2.832e-6■□□□□ 9.6
PABPN1Q86U42 IPO4-208ENST00000559253 579 ntTSL 432.68■■■□□ 2.822e-6■□□□□ 9.6
PABPN1Q86U42 HARS-210ENST00000507746 950 ntTSL 532.4■■■□□ 2.782e-6■□□□□ 9.6
PABPN1Q86U42 GNL1-205ENST00000487166 522 ntTSL 331.67■■■□□ 2.662e-6■□□□□ 9.6
PABPN1Q86U42 PLXNB2-210ENST00000479818 1916 ntTSL 1 (best)31.05■■■□□ 2.562e-6■□□□□ 9.6
PABPN1Q86U42 TCF3-214ENST00000590605 541 ntTSL 229.99■■■□□ 2.392e-6■□□□□ 9.6
PABPN1Q86U42 IPO4-202ENST00000557996 530 ntTSL 429.96■■■□□ 2.392e-6■□□□□ 9.6
PABPN1Q86U42 ACAA1-216ENST00000480865 1540 ntTSL 529.04■■■□□ 2.241e-7■□□□□ 9.6
PABPN1Q86U42 ACAA1-215ENST00000469600 876 ntTSL 228.59■■■□□ 2.171e-7■□□□□ 9.6
PABPN1Q86U42 DMAP1-206ENST00000437511 957 ntTSL 328.18■■■□□ 2.12e-6■□□□□ 9.6
PABPN1Q86U42 IPO4-216ENST00000561034 535 ntTSL 427.74■■■□□ 2.032e-6■□□□□ 9.6
PABPN1Q86U42 TCF3-209ENST00000586410 288 ntTSL 526.82■■□□□ 1.882e-6■□□□□ 9.6
PABPN1Q86U42 POMT1-212ENST00000462375 1001 ntTSL 526.36■■□□□ 1.812e-6■□□□□ 9.6
PABPN1Q86U42 ACAA1-211ENST00000452171 927 ntTSL 326.08■■□□□ 1.771e-7■□□□□ 9.6
PABPN1Q86U42 IPO4-206ENST00000558718 554 ntTSL 225.71■■□□□ 1.712e-6■□□□□ 9.6
PABPN1Q86U42 IPO4-213ENST00000560315 558 ntTSL 225.66■■□□□ 1.72e-6■□□□□ 9.6
PABPN1Q86U42 AC138932.1-201ENST00000534164 6830 ntBASIC25.07■■□□□ 1.62e-6■□□□□ 9.6
PABPN1Q86U42 AL590627.2-202ENST00000636318 138 ntTSL 524.88■■□□□ 1.572e-6■□□□□ 9.6
PABPN1Q86U42 NPIPA1-203ENST00000472413 5345 ntTSL 223.55■■□□□ 1.362e-6■□□□□ 9.6
PABPN1Q86U42 MRPS5-202ENST00000345084 1359 ntTSL 223.51■■□□□ 1.352e-6■□□□□ 9.6
PABPN1Q86U42 CDK5RAP2-217ENST00000484546 1269 ntTSL 1 (best)23.15■■□□□ 1.32e-6■□□□□ 9.6
PABPN1Q86U42 GGA2-214ENST00000569182 587 ntTSL 422.52■■□□□ 1.22e-6■□□□□ 9.6
PABPN1Q86U42 CDK5RAP2-206ENST00000433194 815 ntTSL 322.29■■□□□ 1.162e-6■□□□□ 9.6
PABPN1Q86U42 DMAP1-210ENST00000471829 874 ntTSL 322.12■■□□□ 1.132e-6■□□□□ 9.6
PABPN1Q86U42 PLXNB2-209ENST00000479701 3504 ntTSL 221.77■■□□□ 1.082e-6■□□□□ 9.6
PABPN1Q86U42 TMC6-217ENST00000590934 386 ntTSL 521.39■■□□□ 1.012e-6■□□□□ 9.6
PABPN1Q86U42 ARRDC1-210ENST00000491911 3185 ntTSL 221.33■■□□□ 12e-6■□□□□ 9.6
PABPN1Q86U42 ACAA1-210ENST00000451419 964 ntTSL 320.94■□□□□ 0.941e-7■□□□□ 9.6
PABPN1Q86U42 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.882e-6■□□□□ 9.6
PABPN1Q86U42 NPIPA1-206ENST00000541836 2747 ntTSL 520.39■□□□□ 0.852e-6■□□□□ 9.6
PABPN1Q86U42 CDK5RAP2-213ENST00000480467 931 ntTSL 320.36■□□□□ 0.852e-6■□□□□ 9.6
Retrieved 100 of 8,254 protein–RNA pairs in 78.3 ms