RNA–Protein interactions for RNA: ENST00000472413.5

NPIPA1-203, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 2

Gene NPIPA1, Length 5,345 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-203ENST00000472413 DCAF8L2P0C7V8 631 aa28.13■■■□□ 2.09
NPIPA1-203ENST00000472413 NISCHQ9Y2I1 1504 aa27.46■■□□□ 1.99
NPIPA1-203ENST00000472413 SUPT5HO00267 1087 aaKnown RBP26.36■■□□□ 1.81
NPIPA1-203ENST00000472413 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
NPIPA1-203ENST00000472413 FAM9AQ8IZU1 332 aaPredicted RBP25.25■■□□□ 1.63
NPIPA1-203ENST00000472413 APLP2Q06481 763 aa25.24■■□□□ 1.63
NPIPA1-203ENST00000472413 EHMT2Q96KQ7 1210 aa25.21■■□□□ 1.63
NPIPA1-203ENST00000472413 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
NPIPA1-203ENST00000472413 PELP1Q8IZL8 1130 aaKnown RBP24.45■■□□□ 1.5
NPIPA1-203ENST00000472413 RANGAP1P46060 587 aaPredicted RBP24.37■■□□□ 1.49
NPIPA1-203ENST00000472413 ATP1B4Q9UN42 357 aaPredicted RBP24.32■■□□□ 1.48
NPIPA1-203ENST00000472413 TTBK1Q5TCY1 1321 aaPredicted RBP24.32■■□□□ 1.48
NPIPA1-203ENST00000472413 UBTFP17480 764 aaKnown RBP24.31■■□□□ 1.48
NPIPA1-203ENST00000472413 PCGF6Q9BYE7 350 aa24.12■■□□□ 1.45
NPIPA1-203ENST00000472413 ZEB1P37275 1124 aaPredicted RBP24.03■■□□□ 1.44
NPIPA1-203ENST00000472413 CCER1Q8TC90 406 aaPredicted RBP23.94■■□□□ 1.42
NPIPA1-203ENST00000472413 ABCC9O60706 1549 aa23.79■■□□□ 1.4
NPIPA1-203ENST00000472413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.66■■□□□ 1.38
NPIPA1-203ENST00000472413 HNRNPUL2Q1KMD3 747 aaKnown RBP23.66■■□□□ 1.38
NPIPA1-203ENST00000472413 CENPBP07199 599 aaPredicted RBP23.63■■□□□ 1.37
NPIPA1-203ENST00000472413 MYT1LQ9UL68 1186 aa23.57■■□□□ 1.36
NPIPA1-203ENST00000472413 PABPN1Q86U42 306 aaKnown RBP eCLIP23.55■■□□□ 1.362e-6■□□□□ 9.6
NPIPA1-203ENST00000472413 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
NPIPA1-203ENST00000472413 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
NPIPA1-203ENST00000472413 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.34
NPIPA1-203ENST00000472413 ITGAEP38570 1179 aa23.31■■□□□ 1.32
NPIPA1-203ENST00000472413 NEFLP07196 543 aa23.27■■□□□ 1.32
NPIPA1-203ENST00000472413 ERICH6Q7L0X2 663 aa23.18■■□□□ 1.3
NPIPA1-203ENST00000472413 LOC105371045A0A1W2PR82 267 aa23.18■■□□□ 1.3
NPIPA1-203ENST00000472413 POLR3GLQ9BT43 218 aa23.01■■□□□ 1.27
NPIPA1-203ENST00000472413 HRCP23327 699 aa22.97■■□□□ 1.27
NPIPA1-203ENST00000472413 YTHDC1Q96MU7 727 aaKnown RBP22.97■■□□□ 1.27
NPIPA1-203ENST00000472413 FBLN2P98095 1184 aa22.92■■□□□ 1.26
NPIPA1-203ENST00000472413 FAM50AQ14320 339 aaKnown RBP22.91■■□□□ 1.26
NPIPA1-203ENST00000472413 MYT1Q01538 1121 aa22.86■■□□□ 1.25
NPIPA1-203ENST00000472413 TRIM52Q96A61 297 aa22.79■■□□□ 1.24
NPIPA1-203ENST00000472413 SCRIBQ14160 1630 aa22.76■■□□□ 1.23
NPIPA1-203ENST00000472413 SLC4A1APQ9BWU0 796 aaKnown RBP22.74■■□□□ 1.23
NPIPA1-203ENST00000472413 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
NPIPA1-203ENST00000472413 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
NPIPA1-203ENST00000472413 CSRNP3Q8WYN3 585 aa22.66■■□□□ 1.22
NPIPA1-203ENST00000472413 CDK11AQ9UQ88 783 aaPredicted RBP22.59■■□□□ 1.21
NPIPA1-203ENST00000472413 CNGB1Q14028 1251 aaPredicted RBP22.58■■□□□ 1.2
NPIPA1-203ENST00000472413 DAXXQ9UER7 740 aaPredicted RBP22.54■■□□□ 1.2
NPIPA1-203ENST00000472413 NEUROD1Q13562 356 aa22.48■■□□□ 1.19
NPIPA1-203ENST00000472413 P3H3Q8IVL6 736 aa22.47■■□□□ 1.19
NPIPA1-203ENST00000472413 RB1CC1Q8TDY2 1594 aa22.44■■□□□ 1.18
NPIPA1-203ENST00000472413 NPM1P06748 294 aaKnown RBP eCLIP22.38■■□□□ 1.17
NPIPA1-203ENST00000472413 ZNF326Q5BKZ1 582 aaKnown RBP22.38■■□□□ 1.17
NPIPA1-203ENST00000472413 ARID3CA6NKF2 412 aa22.36■■□□□ 1.17
NPIPA1-203ENST00000472413 DIEXFQ68CQ4 756 aaKnown RBP22.34■■□□□ 1.17
NPIPA1-203ENST00000472413 ZNF777Q9ULD5 760 aaPredicted RBP22.33■■□□□ 1.16
NPIPA1-203ENST00000472413 ESF1Q9H501 851 aaKnown RBP22.3■■□□□ 1.16
NPIPA1-203ENST00000472413 BCANQ96GW7 911 aa22.28■■□□□ 1.16
NPIPA1-203ENST00000472413 ANP32CO43423 234 aa22.23■■□□□ 1.15
NPIPA1-203ENST00000472413 NACADO15069 1562 aa22.21■■□□□ 1.15
NPIPA1-203ENST00000472413 CLSPNQ9HAW4 1339 aa22.19■■□□□ 1.14
NPIPA1-203ENST00000472413 NEFMP07197 916 aa22.15■■□□□ 1.14
NPIPA1-203ENST00000472413 CHMP7Q8WUX9 453 aaPredicted RBP22.13■■□□□ 1.13
NPIPA1-203ENST00000472413 STAG3Q9UJ98 1225 aa22.06■■□□□ 1.12
NPIPA1-203ENST00000472413 ZBTB47Q9UFB7 747 aaPredicted RBP22.04■■□□□ 1.12
NPIPA1-203ENST00000472413 ZNF316A6NFI3 1004 aaPredicted RBP22■■□□□ 1.11
NPIPA1-203ENST00000472413 TSPY4P0CV99 314 aa21.97■■□□□ 1.11
NPIPA1-203ENST00000472413 TSPY10P0CW01 314 aa21.97■■□□□ 1.11
NPIPA1-203ENST00000472413 CHGAP10645 457 aaKnown RBP21.96■■□□□ 1.11
NPIPA1-203ENST00000472413 BAZ1BQ9UIG0 1483 aaKnown RBP21.95■■□□□ 1.1
NPIPA1-203ENST00000472413 TONSLQ96HA7 1378 aa21.94■■□□□ 1.1
NPIPA1-203ENST00000472413 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
NPIPA1-203ENST00000472413 SLC24A1O60721 1099 aa21.91■■□□□ 1.1
NPIPA1-203ENST00000472413 EEA1Q15075 1411 aa21.91■■□□□ 1.1
NPIPA1-203ENST00000472413 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.09
NPIPA1-203ENST00000472413 CANXP27824 592 aaKnown RBP21.88■■□□□ 1.09
NPIPA1-203ENST00000472413 CLIP1P30622 1438 aa21.8■■□□□ 1.08
NPIPA1-203ENST00000472413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.8■■□□□ 1.084e-9■■□□□ 12.3
NPIPA1-203ENST00000472413 CHIC2Q9UKJ5 165 aa21.79■■□□□ 1.08
NPIPA1-203ENST00000472413 ACIN1Q9UKV3 1341 aaKnown RBP21.78■■□□□ 1.08
NPIPA1-203ENST00000472413 RTL5Q5HYW3 569 aaPredicted RBP21.78■■□□□ 1.08
NPIPA1-203ENST00000472413 PLEKHD1A6NEE1 506 aa21.78■■□□□ 1.08
NPIPA1-203ENST00000472413 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
NPIPA1-203ENST00000472413 DCAF1Q9Y4B6 1507 aa21.77■■□□□ 1.08
NPIPA1-203ENST00000472413 PLPPR3Q6T4P5 718 aa21.75■■□□□ 1.07
NPIPA1-203ENST00000472413 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
NPIPA1-203ENST00000472413 BAZ1AQ9NRL2 1556 aaPredicted RBP21.73■■□□□ 1.07
NPIPA1-203ENST00000472413 ERCC6Q03468 1493 aa21.73■■□□□ 1.07
NPIPA1-203ENST00000472413 GOLGA3Q08378 1498 aa21.71■■□□□ 1.07
NPIPA1-203ENST00000472413 GTF3C3Q9Y5Q9 886 aa21.67■■□□□ 1.06
NPIPA1-203ENST00000472413 KCNH8Q96L42 1107 aa21.65■■□□□ 1.06
NPIPA1-203ENST00000472413 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
NPIPA1-203ENST00000472413 KDM2AQ9Y2K7 1162 aa21.52■■□□□ 1.04
NPIPA1-203ENST00000472413 CFDP1Q9UEE9 299 aaPredicted RBP21.52■■□□□ 1.04
NPIPA1-203ENST00000472413 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
NPIPA1-203ENST00000472413 PPP1R15AO75807 674 aaPredicted RBP21.51■■□□□ 1.03
NPIPA1-203ENST00000472413 BCL11AQ9H165 835 aa21.5■■□□□ 1.03
NPIPA1-203ENST00000472413 RRP7BPQ9NSQ0 103 aa21.49■■□□□ 1.03
NPIPA1-203ENST00000472413 TNIKQ9UKE5 1360 aa21.47■■□□□ 1.03
NPIPA1-203ENST00000472413 TMC1Q8TDI8 760 aa21.46■■□□□ 1.03
NPIPA1-203ENST00000472413 DDX10Q13206 875 aaKnown RBP21.46■■□□□ 1.03
NPIPA1-203ENST00000472413 WDR43Q15061 677 aaKnown RBP eCLIP21.43■■□□□ 1.02
NPIPA1-203ENST00000472413 ARID4BQ4LE39 1312 aaPredicted RBP21.42■■□□□ 1.02
NPIPA1-203ENST00000472413 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms