RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-206ENST00000541836 NISCHQ9Y2I1 1504 aa26.49■■□□□ 1.83
NPIPA1-206ENST00000541836 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
NPIPA1-206ENST00000541836 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.28
NPIPA1-206ENST00000541836 HRCP23327 699 aa23.04■■□□□ 1.28
NPIPA1-206ENST00000541836 MYO15BQ96JP2 1530 aa22.71■■□□□ 1.23
NPIPA1-206ENST00000541836 PCGF6Q9BYE7 350 aa22.69■■□□□ 1.22
NPIPA1-206ENST00000541836 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
NPIPA1-206ENST00000541836 PPARGC1BQ86YN6 1023 aaKnown RBP22.59■■□□□ 1.21
NPIPA1-206ENST00000541836 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
NPIPA1-206ENST00000541836 ZCCHC6Q5VYS8 1495 aaKnown RBP22.38■■□□□ 1.17
NPIPA1-206ENST00000541836 DCAF8L2P0C7V8 631 aa22.29■■□□□ 1.16
NPIPA1-206ENST00000541836 DCAF1Q9Y4B6 1507 aa22.18■■□□□ 1.14
NPIPA1-206ENST00000541836 LOC105371045A0A1W2PR82 267 aa22.09■■□□□ 1.13
NPIPA1-206ENST00000541836 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
NPIPA1-206ENST00000541836 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
NPIPA1-206ENST00000541836 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
NPIPA1-206ENST00000541836 SCAF1Q9H7N4 1312 aaKnown RBP21.7■■□□□ 1.06
NPIPA1-206ENST00000541836 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
NPIPA1-206ENST00000541836 FAM9AQ8IZU1 332 aaPredicted RBP21.35■■□□□ 1.01
NPIPA1-206ENST00000541836 ABCC9O60706 1549 aa21.3■■□□□ 1
NPIPA1-206ENST00000541836 EHMT2Q96KQ7 1210 aa21.26■□□□□ 0.99
NPIPA1-206ENST00000541836 ACIN1Q9UKV3 1341 aaKnown RBP21.23■□□□□ 0.99
NPIPA1-206ENST00000541836 SCRIBQ14160 1630 aa21.2■□□□□ 0.98
NPIPA1-206ENST00000541836 NEUROD1Q13562 356 aa21.18■□□□□ 0.98
NPIPA1-206ENST00000541836 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
NPIPA1-206ENST00000541836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.1■□□□□ 0.97
NPIPA1-206ENST00000541836 CCER1Q8TC90 406 aaPredicted RBP21.06■□□□□ 0.96
NPIPA1-206ENST00000541836 GTF3C3Q9Y5Q9 886 aa21.06■□□□□ 0.96
NPIPA1-206ENST00000541836 RB1CC1Q8TDY2 1594 aa21.04■□□□□ 0.96
NPIPA1-206ENST00000541836 MYT1Q01538 1121 aa21.02■□□□□ 0.96
NPIPA1-206ENST00000541836 CENPBP07199 599 aaPredicted RBP21.01■□□□□ 0.95
NPIPA1-206ENST00000541836 DIEXFQ68CQ4 756 aaKnown RBP20.99■□□□□ 0.95
NPIPA1-206ENST00000541836 NACADO15069 1562 aa20.9■□□□□ 0.94
NPIPA1-206ENST00000541836 CECR2Q9BXF3 1484 aa20.79■□□□□ 0.92
NPIPA1-206ENST00000541836 TTBK1Q5TCY1 1321 aaPredicted RBP20.73■□□□□ 0.91
NPIPA1-206ENST00000541836 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
NPIPA1-206ENST00000541836 YTHDC1Q96MU7 727 aaKnown RBP20.65■□□□□ 0.9
NPIPA1-206ENST00000541836 ZNF316A6NFI3 1004 aaPredicted RBP20.61■□□□□ 0.89
NPIPA1-206ENST00000541836 WIZO95785 1651 aa20.58■□□□□ 0.89
NPIPA1-206ENST00000541836 WRNQ14191 1432 aaPredicted RBP eCLIP20.52■□□□□ 0.88
NPIPA1-206ENST00000541836 CEP162Q5TB80 1403 aa20.46■□□□□ 0.87
NPIPA1-206ENST00000541836 MIER1Q8N108 512 aa20.46■□□□□ 0.87
NPIPA1-206ENST00000541836 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.852e-6■□□□□ 9.6
NPIPA1-206ENST00000541836 EIF4G1Q04637 1599 aaKnown RBP20.38■□□□□ 0.85
NPIPA1-206ENST00000541836 CCDC88BA6NC98 1476 aa20.35■□□□□ 0.85
NPIPA1-206ENST00000541836 UNC13AQ9UPW8 1703 aa20.35■□□□□ 0.85
NPIPA1-206ENST00000541836 ABCC8Q09428 1581 aa20.33■□□□□ 0.84
NPIPA1-206ENST00000541836 TNIKQ9UKE5 1360 aa20.33■□□□□ 0.84
NPIPA1-206ENST00000541836 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
NPIPA1-206ENST00000541836 UBTFP17480 764 aaKnown RBP20.29■□□□□ 0.84
NPIPA1-206ENST00000541836 SOGA1O94964 1423 aa20.27■□□□□ 0.84
NPIPA1-206ENST00000541836 HNRNPUL2Q1KMD3 747 aaKnown RBP20.27■□□□□ 0.84
NPIPA1-206ENST00000541836 CSRNP3Q8WYN3 585 aa20.21■□□□□ 0.83
NPIPA1-206ENST00000541836 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
NPIPA1-206ENST00000541836 RUSC2Q8N2Y8 1516 aa20.15■□□□□ 0.82
NPIPA1-206ENST00000541836 TOP2AP11388 1531 aaKnown RBP20.13■□□□□ 0.81
NPIPA1-206ENST00000541836 BICRAQ9NZM4 1560 aa20.13■□□□□ 0.81
NPIPA1-206ENST00000541836 EEA1Q15075 1411 aa20.12■□□□□ 0.81
NPIPA1-206ENST00000541836 GOLGA3Q08378 1498 aa20.1■□□□□ 0.81
NPIPA1-206ENST00000541836 SUPT16HQ9Y5B9 1047 aaKnown RBP20.08■□□□□ 0.81
NPIPA1-206ENST00000541836 SMARCA2P51531 1590 aa20.08■□□□□ 0.8
NPIPA1-206ENST00000541836 CLSPNQ9HAW4 1339 aa20.04■□□□□ 0.8
NPIPA1-206ENST00000541836 APLP2Q06481 763 aa19.96■□□□□ 0.79
NPIPA1-206ENST00000541836 CLIP1P30622 1438 aa19.95■□□□□ 0.78
NPIPA1-206ENST00000541836 TSHZ2Q9NRE2 1034 aa19.94■□□□□ 0.78
NPIPA1-206ENST00000541836 CEP164Q9UPV0 1460 aa19.9■□□□□ 0.78
NPIPA1-206ENST00000541836 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
NPIPA1-206ENST00000541836 ANP32EQ9BTT0 268 aa19.89■□□□□ 0.78
NPIPA1-206ENST00000541836 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
NPIPA1-206ENST00000541836 DHX57Q6P158 1386 aaKnown RBP19.83■□□□□ 0.76
NPIPA1-206ENST00000541836 KIF21BO75037 1637 aa19.82■□□□□ 0.76
NPIPA1-206ENST00000541836 RAPGEF2Q9Y4G8 1499 aa19.73■□□□□ 0.75
NPIPA1-206ENST00000541836 BCL11AQ9H165 835 aa19.72■□□□□ 0.75
NPIPA1-206ENST00000541836 ATAD2BQ9ULI0 1458 aa19.72■□□□□ 0.75
NPIPA1-206ENST00000541836 SYNJ1O43426 1573 aa19.71■□□□□ 0.75
NPIPA1-206ENST00000541836 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
NPIPA1-206ENST00000541836 BCANQ96GW7 911 aa19.71■□□□□ 0.75
NPIPA1-206ENST00000541836 KCNH8Q96L42 1107 aa19.7■□□□□ 0.74
NPIPA1-206ENST00000541836 PEG3Q9GZU2 1588 aa19.69■□□□□ 0.74
NPIPA1-206ENST00000541836 FKBP8Q14318 412 aa19.61■□□□□ 0.73
NPIPA1-206ENST00000541836 KANK4Q5T7N3 995 aaPredicted RBP19.6■□□□□ 0.73
NPIPA1-206ENST00000541836 ITGAEP38570 1179 aa19.53■□□□□ 0.72
NPIPA1-206ENST00000541836 RRBP1Q9P2E9 1410 aaKnown RBP19.51■□□□□ 0.71
NPIPA1-206ENST00000541836 ARAP1Q96P48 1450 aa19.5■□□□□ 0.71
NPIPA1-206ENST00000541836 RBM19Q9Y4C8 960 aaKnown RBP19.5■□□□□ 0.71
NPIPA1-206ENST00000541836 NEFLP07196 543 aa19.47■□□□□ 0.71
NPIPA1-206ENST00000541836 DDX10Q13206 875 aaKnown RBP19.47■□□□□ 0.71
NPIPA1-206ENST00000541836 CCNB3Q8WWL7 1395 aa19.46■□□□□ 0.71
NPIPA1-206ENST00000541836 CUX2O14529 1486 aa19.46■□□□□ 0.71
NPIPA1-206ENST00000541836 RAB3GAP2Q9H2M9 1393 aa19.4■□□□□ 0.7
NPIPA1-206ENST00000541836 TRIM52Q96A61 297 aa19.38■□□□□ 0.69
NPIPA1-206ENST00000541836 ERICH3Q5RHP9 1530 aa19.38■□□□□ 0.69
NPIPA1-206ENST00000541836 PRXQ9BXM0 1461 aa19.37■□□□□ 0.69
NPIPA1-206ENST00000541836 MAPKBP1O60336 1514 aa19.37■□□□□ 0.69
NPIPA1-206ENST00000541836 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
NPIPA1-206ENST00000541836 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
NPIPA1-206ENST00000541836 WDR97A6NE52 1622 aa19.32■□□□□ 0.68
NPIPA1-206ENST00000541836 PPP1R15AO75807 674 aaPredicted RBP19.32■□□□□ 0.68
NPIPA1-206ENST00000541836 SIN3AQ96ST3 1273 aa19.31■□□□□ 0.68
NPIPA1-206ENST00000541836 HIRIP3Q9BW71 556 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms