Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
MRPL54Q6P161 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
MRPL54Q6P161 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPL54Q6P161 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
MRPL54Q6P161 LINC01465-201ENST00000408887 1940 ntBASIC15.02□□□□□ -0.01
MRPL54Q6P161 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.01□□□□□ -0.01
MRPL54Q6P161 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
MRPL54Q6P161 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.01□□□□□ -0.01
MRPL54Q6P161 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 AC020916.1-201ENST00000587762 1774 ntBASIC15.01□□□□□ -0.01
MRPL54Q6P161 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.01□□□□□ -0.01
MRPL54Q6P161 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MRPL54Q6P161 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
MRPL54Q6P161 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.01□□□□□ -0.01
MRPL54Q6P161 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.01□□□□□ -0.01
MRPL54Q6P161 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
MRPL54Q6P161 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
MRPL54Q6P161 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
MRPL54Q6P161 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
MRPL54Q6P161 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.01□□□□□ -0.01
MRPL54Q6P161 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MRPL54Q6P161 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
MRPL54Q6P161 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15□□□□□ -0.01
MRPL54Q6P161 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
MRPL54Q6P161 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MRPL54Q6P161 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MRPL54Q6P161 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MRPL54Q6P161 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MRPL54Q6P161 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15□□□□□ -0.01
MRPL54Q6P161 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 AC104581.1-202ENST00000635932 2618 ntBASIC15□□□□□ -0.01
MRPL54Q6P161 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15□□□□□ -0.01
MRPL54Q6P161 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15□□□□□ -0.01
MRPL54Q6P161 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
MRPL54Q6P161 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.99□□□□□ -0.01
MRPL54Q6P161 AC055733.4-201ENST00000638462 1354 ntBASIC14.99□□□□□ -0.01
MRPL54Q6P161 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
MRPL54Q6P161 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
MRPL54Q6P161 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
MRPL54Q6P161 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.99□□□□□ -0.01
MRPL54Q6P161 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 MIR3181-201ENST00000578512 73 ntBASIC14.99□□□□□ -0.01
MRPL54Q6P161 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.99□□□□□ -0.01
MRPL54Q6P161 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.99□□□□□ -0.01
MRPL54Q6P161 AC099791.2-201ENST00000605725 427 ntBASIC14.99□□□□□ -0.01
MRPL54Q6P161 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.99□□□□□ -0.01
MRPL54Q6P161 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
MRPL54Q6P161 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MRPL54Q6P161 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL54Q6P161 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL54Q6P161 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
MRPL54Q6P161 PCDHB18P-201ENST00000524813 2368 ntBASIC14.98□□□□□ -0.01
MRPL54Q6P161 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL54Q6P161 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms