Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 AL162377.1-201ENST00000618844 1793 ntBASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRFAM7AQ494W8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 AC091874.3-201ENST00000512672 1195 ntBASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRFAM7AQ494W8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRFAM7AQ494W8 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRFAM7AQ494W8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRFAM7AQ494W8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRFAM7AQ494W8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.33■□□□□ 0.37
CHRFAM7AQ494W8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 AC026366.1-201ENST00000488803 879 ntBASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 AC008550.1-201ENST00000511500 884 ntBASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRFAM7AQ494W8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 AC099778.1-201ENST00000568593 1911 ntBASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 UBE2SP1-201ENST00000450587 669 ntBASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRFAM7AQ494W8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms