Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.03■□□□□ 0.64
VSX2P58304 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.03■□□□□ 0.64
VSX2P58304 AL157384.1-201ENST00000445995 2473 ntBASIC19.03■□□□□ 0.64
VSX2P58304 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.03■□□□□ 0.64
VSX2P58304 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
VSX2P58304 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VSX2P58304 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VSX2P58304 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VSX2P58304 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VSX2P58304 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 KRT16P6-202ENST00000425692 1426 ntBASIC19.02■□□□□ 0.64
VSX2P58304 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
VSX2P58304 C1QBPP2-201ENST00000528754 825 ntBASIC19.02■□□□□ 0.64
VSX2P58304 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
VSX2P58304 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.02■□□□□ 0.64
VSX2P58304 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.02■□□□□ 0.64
VSX2P58304 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
VSX2P58304 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VSX2P58304 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.02■□□□□ 0.64
VSX2P58304 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VSX2P58304 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VSX2P58304 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VSX2P58304 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.02■□□□□ 0.63
VSX2P58304 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VSX2P58304 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
VSX2P58304 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
VSX2P58304 AL512408.1-201ENST00000569378 2000 ntBASIC19.01■□□□□ 0.63
VSX2P58304 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.01■□□□□ 0.63
VSX2P58304 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VSX2P58304 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VSX2P58304 GABARAPL3-202ENST00000624044 1851 ntBASIC19.01■□□□□ 0.63
VSX2P58304 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.01■□□□□ 0.63
VSX2P58304 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VSX2P58304 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.01■□□□□ 0.63
VSX2P58304 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VSX2P58304 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VSX2P58304 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.01■□□□□ 0.63
VSX2P58304 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.01■□□□□ 0.63
VSX2P58304 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VSX2P58304 MTDHP1-201ENST00000605323 784 ntBASIC19.01■□□□□ 0.63
VSX2P58304 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
VSX2P58304 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VSX2P58304 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VSX2P58304 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VSX2P58304 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VSX2P58304 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VSX2P58304 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19■□□□□ 0.63
VSX2P58304 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19■□□□□ 0.63
VSX2P58304 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VSX2P58304 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VSX2P58304 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
VSX2P58304 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VSX2P58304 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19■□□□□ 0.63
VSX2P58304 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VSX2P58304 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VSX2P58304 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VSX2P58304 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VSX2P58304 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19■□□□□ 0.63
VSX2P58304 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19■□□□□ 0.63
VSX2P58304 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19■□□□□ 0.63
VSX2P58304 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
VSX2P58304 GCSHP5-201ENST00000443090 522 ntBASIC19■□□□□ 0.63
VSX2P58304 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19■□□□□ 0.63
VSX2P58304 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19■□□□□ 0.63
VSX2P58304 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19■□□□□ 0.63
VSX2P58304 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
VSX2P58304 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VSX2P58304 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VSX2P58304 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VSX2P58304 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
VSX2P58304 LINC01006-201ENST00000333319 2292 ntBASIC19■□□□□ 0.63
VSX2P58304 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VSX2P58304 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
VSX2P58304 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
VSX2P58304 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VSX2P58304 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19■□□□□ 0.63
VSX2P58304 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VSX2P58304 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VSX2P58304 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VSX2P58304 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VSX2P58304 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VSX2P58304 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VSX2P58304 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.99■□□□□ 0.63
VSX2P58304 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VSX2P58304 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VSX2P58304 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.99■□□□□ 0.63
VSX2P58304 RPPH1-201ENST00000516869 333 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms