Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 CD37-204ENST00000535669 1674 ntTSL 2 BASIC26.09■■□□□ 1.77
RIPK4P57078 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC26.09■■□□□ 1.77
RIPK4P57078 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RIPK4P57078 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC26.09■■□□□ 1.77
RIPK4P57078 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
RIPK4P57078 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RIPK4P57078 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RIPK4P57078 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RIPK4P57078 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC26.08■■□□□ 1.77
RIPK4P57078 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC26.08■■□□□ 1.77
RIPK4P57078 AC124016.1-201ENST00000609552 612 ntBASIC26.08■■□□□ 1.77
RIPK4P57078 AL121906.2-201ENST00000621597 723 ntBASIC26.08■■□□□ 1.77
RIPK4P57078 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RIPK4P57078 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RIPK4P57078 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
RIPK4P57078 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
RIPK4P57078 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RIPK4P57078 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC26.07■■□□□ 1.76
RIPK4P57078 AL691432.2-201ENST00000607222 2038 ntBASIC26.07■■□□□ 1.76
RIPK4P57078 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC26.07■■□□□ 1.76
RIPK4P57078 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
RIPK4P57078 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC26.07■■□□□ 1.76
RIPK4P57078 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RIPK4P57078 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RIPK4P57078 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
RIPK4P57078 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RIPK4P57078 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.07■■□□□ 1.76
RIPK4P57078 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.07■■□□□ 1.76
RIPK4P57078 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
RIPK4P57078 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC26.07■■□□□ 1.76
RIPK4P57078 LINC01521-201ENST00000504184 1943 ntBASIC26.07■■□□□ 1.76
RIPK4P57078 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC26.07■■□□□ 1.76
RIPK4P57078 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RIPK4P57078 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RIPK4P57078 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RIPK4P57078 USP39-204ENST00000409766 2033 ntTSL 2 BASIC26.07■■□□□ 1.76
RIPK4P57078 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RIPK4P57078 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RIPK4P57078 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
RIPK4P57078 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
RIPK4P57078 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIPK4P57078 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIPK4P57078 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIPK4P57078 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC26.06■■□□□ 1.76
RIPK4P57078 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
RIPK4P57078 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIPK4P57078 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIPK4P57078 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC26.06■■□□□ 1.76
RIPK4P57078 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RIPK4P57078 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.06■■□□□ 1.76
RIPK4P57078 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC26.06■■□□□ 1.76
RIPK4P57078 AC116351.2-201ENST00000606540 1585 ntBASIC26.06■■□□□ 1.76
RIPK4P57078 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC26.06■■□□□ 1.76
RIPK4P57078 SLC25A24-204ENST00000569674 2357 ntBASIC26.06■■□□□ 1.76
RIPK4P57078 PHGDH-210ENST00000641115 1638 ntBASIC26.06■■□□□ 1.76
RIPK4P57078 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIPK4P57078 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RIPK4P57078 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC26.06■■□□□ 1.76
RIPK4P57078 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
RIPK4P57078 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RIPK4P57078 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
RIPK4P57078 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RIPK4P57078 AC018553.1-201ENST00000616682 1458 ntBASIC26.05■■□□□ 1.76
RIPK4P57078 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RIPK4P57078 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC26.05■■□□□ 1.76
RIPK4P57078 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RIPK4P57078 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
RIPK4P57078 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
RIPK4P57078 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RIPK4P57078 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RIPK4P57078 KRASP1-201ENST00000407852 552 ntBASIC26.05■■□□□ 1.76
RIPK4P57078 AC239809.2-201ENST00000415381 517 ntBASIC26.05■■□□□ 1.76
RIPK4P57078 AC133681.1-201ENST00000465482 601 ntBASIC26.05■■□□□ 1.76
RIPK4P57078 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC26.05■■□□□ 1.76
RIPK4P57078 PRKY-204ENST00000533551 1019 ntBASIC26.05■■□□□ 1.76
RIPK4P57078 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.05■■□□□ 1.76
RIPK4P57078 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC26.05■■□□□ 1.76
RIPK4P57078 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.05■■□□□ 1.76
RIPK4P57078 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.05■■□□□ 1.76
RIPK4P57078 FAM197Y4-202ENST00000622692 608 ntBASIC26.05■■□□□ 1.76
RIPK4P57078 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RIPK4P57078 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RIPK4P57078 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
RIPK4P57078 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RIPK4P57078 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RIPK4P57078 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIPK4P57078 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIPK4P57078 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RIPK4P57078 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC26.04■■□□□ 1.76
RIPK4P57078 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIPK4P57078 MOK-225ENST00000522867 1883 ntTSL 5 BASIC26.04■■□□□ 1.76
RIPK4P57078 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIPK4P57078 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIPK4P57078 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC26.04■■□□□ 1.76
RIPK4P57078 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RIPK4P57078 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26.04■■□□□ 1.76
RIPK4P57078 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RIPK4P57078 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC26.04■■□□□ 1.76
RIPK4P57078 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
RIPK4P57078 AC066615.1-201ENST00000640911 628 ntBASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms