Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN12P56749 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN12P56749 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN12P56749 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.27■□□□□ 0.36
CLDN12P56749 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN12P56749 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLDN12P56749 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN12P56749 AC091799.1-201ENST00000422823 811 ntBASIC17.27■□□□□ 0.36
CLDN12P56749 AC091305.1-201ENST00000479476 895 ntBASIC17.27■□□□□ 0.36
CLDN12P56749 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN12P56749 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN12P56749 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.27■□□□□ 0.36
CLDN12P56749 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN12P56749 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN12P56749 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN12P56749 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN12P56749 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN12P56749 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN12P56749 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.27■□□□□ 0.35
CLDN12P56749 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CLDN12P56749 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CLDN12P56749 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN12P56749 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CLDN12P56749 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN12P56749 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 AC007322.3-201ENST00000426526 701 ntBASIC17.26■□□□□ 0.35
CLDN12P56749 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN12P56749 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN12P56749 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN12P56749 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN12P56749 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN12P56749 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDN12P56749 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN12P56749 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN12P56749 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLDN12P56749 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN12P56749 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLDN12P56749 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN12P56749 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLDN12P56749 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDN12P56749 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN12P56749 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.25■□□□□ 0.35
CLDN12P56749 DUX4L2-201ENST00000561772 1275 ntBASIC17.25■□□□□ 0.35
CLDN12P56749 AC104187.1-201ENST00000607510 612 ntBASIC17.25■□□□□ 0.35
CLDN12P56749 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
CLDN12P56749 AL136967.2-201ENST00000623968 743 ntBASIC17.25■□□□□ 0.35
CLDN12P56749 DUX4L6-201ENST00000626483 1275 ntBASIC17.25■□□□□ 0.35
CLDN12P56749 DUX4L1-201ENST00000627662 1275 ntBASIC17.25■□□□□ 0.35
CLDN12P56749 DUX4L8-201ENST00000629013 1275 ntBASIC17.25■□□□□ 0.35
CLDN12P56749 DUX4L3-201ENST00000630187 1275 ntBASIC17.25■□□□□ 0.35
CLDN12P56749 DUX4L7-201ENST00000630678 1275 ntBASIC17.25■□□□□ 0.35
CLDN12P56749 DUX4L5-201ENST00000630834 1275 ntBASIC17.25■□□□□ 0.35
CLDN12P56749 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN12P56749 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN12P56749 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN12P56749 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDN12P56749 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN12P56749 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CLDN12P56749 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN12P56749 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN12P56749 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN12P56749 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN12P56749 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN12P56749 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLDN12P56749 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN12P56749 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN12P56749 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms