Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CLTCL1P53675 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CLTCL1P53675 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CLTCL1P53675 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CLTCL1P53675 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CLTCL1P53675 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC28.66■■■□□ 2.18
CLTCL1P53675 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CLTCL1P53675 PHGDH-210ENST00000641115 1638 ntBASIC28.66■■■□□ 2.18
CLTCL1P53675 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC28.66■■■□□ 2.18
CLTCL1P53675 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CLTCL1P53675 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
CLTCL1P53675 PRR31-201ENST00000371629 978 ntTSL 2 BASIC28.65■■■□□ 2.18
CLTCL1P53675 CRAT-202ENST00000393384 973 ntTSL 2 BASIC28.65■■■□□ 2.18
CLTCL1P53675 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC28.65■■■□□ 2.18
CLTCL1P53675 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC28.65■■■□□ 2.18
CLTCL1P53675 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC28.65■■■□□ 2.18
CLTCL1P53675 B3GAT3P1-201ENST00000471720 806 ntBASIC28.65■■■□□ 2.18
CLTCL1P53675 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC28.65■■■□□ 2.18
CLTCL1P53675 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC28.65■■■□□ 2.18
CLTCL1P53675 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC28.65■■■□□ 2.18
CLTCL1P53675 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CLTCL1P53675 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC28.65■■■□□ 2.18
CLTCL1P53675 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CLTCL1P53675 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
CLTCL1P53675 SLC25A3P1-201ENST00000443844 931 ntBASIC28.65■■■□□ 2.18
CLTCL1P53675 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC28.65■■■□□ 2.18
CLTCL1P53675 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC28.65■■■□□ 2.18
CLTCL1P53675 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
CLTCL1P53675 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC28.64■■■□□ 2.18
CLTCL1P53675 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CLTCL1P53675 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC28.64■■■□□ 2.18
CLTCL1P53675 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC28.64■■■□□ 2.18
CLTCL1P53675 AC005521.1-201ENST00000393351 872 ntBASIC28.64■■■□□ 2.18
CLTCL1P53675 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CLTCL1P53675 KRT18P35-201ENST00000510488 1269 ntBASIC28.64■■■□□ 2.18
CLTCL1P53675 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CLTCL1P53675 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC28.64■■■□□ 2.18
CLTCL1P53675 DGCR10-201ENST00000609839 495 ntBASIC28.64■■■□□ 2.18
CLTCL1P53675 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC28.64■■■□□ 2.18
CLTCL1P53675 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.17
CLTCL1P53675 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.17
CLTCL1P53675 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC28.63■■■□□ 2.17
CLTCL1P53675 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
CLTCL1P53675 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC28.63■■■□□ 2.17
CLTCL1P53675 AC092720.2-201ENST00000602388 1665 ntBASIC28.63■■■□□ 2.17
CLTCL1P53675 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CLTCL1P53675 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CLTCL1P53675 AC004980.1-204ENST00000429707 299 ntBASIC28.63■■■□□ 2.17
CLTCL1P53675 AL031985.4-201ENST00000642138 673 ntBASIC28.63■■■□□ 2.17
CLTCL1P53675 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
CLTCL1P53675 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CLTCL1P53675 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
CLTCL1P53675 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CLTCL1P53675 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
CLTCL1P53675 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC28.63■■■□□ 2.17
CLTCL1P53675 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
CLTCL1P53675 GOLGA6L3-201ENST00000507199 1679 ntBASIC28.63■■■□□ 2.17
CLTCL1P53675 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC28.62■■■□□ 2.17
CLTCL1P53675 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CLTCL1P53675 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC28.62■■■□□ 2.17
CLTCL1P53675 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CLTCL1P53675 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC28.62■■■□□ 2.17
CLTCL1P53675 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CLTCL1P53675 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CLTCL1P53675 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CLTCL1P53675 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
CLTCL1P53675 STK25-204ENST00000405585 1643 ntTSL 2 BASIC28.62■■■□□ 2.17
CLTCL1P53675 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
CLTCL1P53675 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CLTCL1P53675 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC28.62■■■□□ 2.17
CLTCL1P53675 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
CLTCL1P53675 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC28.62■■■□□ 2.17
CLTCL1P53675 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CLTCL1P53675 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CLTCL1P53675 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CLTCL1P53675 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC28.61■■■□□ 2.17
CLTCL1P53675 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC28.61■■■□□ 2.17
CLTCL1P53675 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
CLTCL1P53675 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC28.61■■■□□ 2.17
CLTCL1P53675 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CLTCL1P53675 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC28.61■■■□□ 2.17
CLTCL1P53675 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CLTCL1P53675 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC28.61■■■□□ 2.17
CLTCL1P53675 LINC01568-207ENST00000641790 1380 ntBASIC28.61■■■□□ 2.17
CLTCL1P53675 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC28.61■■■□□ 2.17
CLTCL1P53675 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CLTCL1P53675 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
CLTCL1P53675 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CLTCL1P53675 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC28.6■■■□□ 2.17
CLTCL1P53675 AC073508.3-201ENST00000619697 1419 ntBASIC28.59■■■□□ 2.17
CLTCL1P53675 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CLTCL1P53675 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC28.59■■■□□ 2.17
CLTCL1P53675 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC28.59■■■□□ 2.17
CLTCL1P53675 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
CLTCL1P53675 NAPSB-206ENST00000562112 1266 ntBASIC28.59■■■□□ 2.17
CLTCL1P53675 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CLTCL1P53675 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC28.59■■■□□ 2.17
CLTCL1P53675 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
CLTCL1P53675 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
CLTCL1P53675 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms