Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMSP52788 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMSP52788 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.59■□□□□ 0.57
SMSP52788 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.59■□□□□ 0.57
SMSP52788 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMSP52788 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMSP52788 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMSP52788 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMSP52788 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMSP52788 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMSP52788 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMSP52788 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMSP52788 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SMSP52788 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.58■□□□□ 0.57
SMSP52788 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.58■□□□□ 0.57
SMSP52788 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMSP52788 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMSP52788 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SMSP52788 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.58■□□□□ 0.56
SMSP52788 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.58■□□□□ 0.56
SMSP52788 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMSP52788 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SMSP52788 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMSP52788 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.58■□□□□ 0.56
SMSP52788 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SMSP52788 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.58■□□□□ 0.56
SMSP52788 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMSP52788 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMSP52788 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMSP52788 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMSP52788 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMSP52788 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SMSP52788 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMSP52788 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.58■□□□□ 0.56
SMSP52788 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.58■□□□□ 0.56
SMSP52788 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMSP52788 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMSP52788 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SMSP52788 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.57■□□□□ 0.56
SMSP52788 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.57■□□□□ 0.56
SMSP52788 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.57■□□□□ 0.56
SMSP52788 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.57■□□□□ 0.56
SMSP52788 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SMSP52788 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.57■□□□□ 0.56
SMSP52788 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMSP52788 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.57■□□□□ 0.56
SMSP52788 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.57■□□□□ 0.56
SMSP52788 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.57■□□□□ 0.56
SMSP52788 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMSP52788 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMSP52788 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMSP52788 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SMSP52788 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMSP52788 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SMSP52788 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SMSP52788 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMSP52788 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.56■□□□□ 0.56
SMSP52788 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.56■□□□□ 0.56
SMSP52788 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.56■□□□□ 0.56
SMSP52788 UBE2SP1-201ENST00000450587 669 ntBASIC18.56■□□□□ 0.56
SMSP52788 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.56■□□□□ 0.56
SMSP52788 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.56■□□□□ 0.56
SMSP52788 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.56■□□□□ 0.56
SMSP52788 AC073648.6-201ENST00000641589 218 ntBASIC18.56■□□□□ 0.56
SMSP52788 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMSP52788 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.56■□□□□ 0.56
SMSP52788 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMSP52788 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SMSP52788 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.56■□□□□ 0.56
SMSP52788 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMSP52788 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMSP52788 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMSP52788 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMSP52788 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMSP52788 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.55■□□□□ 0.56
SMSP52788 TCF3P1-201ENST00000423021 1937 ntBASIC18.55■□□□□ 0.56
SMSP52788 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMSP52788 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMSP52788 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.55■□□□□ 0.56
SMSP52788 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMSP52788 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.55■□□□□ 0.56
SMSP52788 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms