Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.67■■□□□ 1.38
NEK4P51957 KRT8P20-201ENST00000423953 1409 ntBASIC23.67■■□□□ 1.38
NEK4P51957 KRT16P6-202ENST00000425692 1426 ntBASIC23.67■■□□□ 1.38
NEK4P51957 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NEK4P51957 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.67■■□□□ 1.38
NEK4P51957 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK4P51957 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK4P51957 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK4P51957 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NEK4P51957 AC069236.1-201ENST00000604339 616 ntBASIC23.66■■□□□ 1.38
NEK4P51957 BID-214ENST00000617586 542 ntTSL 5 BASIC23.66■■□□□ 1.38
NEK4P51957 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK4P51957 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK4P51957 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK4P51957 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
NEK4P51957 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NEK4P51957 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.66■■□□□ 1.38
NEK4P51957 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK4P51957 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NEK4P51957 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NEK4P51957 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
NEK4P51957 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NEK4P51957 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
NEK4P51957 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NEK4P51957 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NEK4P51957 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
NEK4P51957 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NEK4P51957 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.65■■□□□ 1.38
NEK4P51957 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.65■■□□□ 1.38
NEK4P51957 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NEK4P51957 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NEK4P51957 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.65■■□□□ 1.38
NEK4P51957 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.65■■□□□ 1.38
NEK4P51957 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NEK4P51957 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.65■■□□□ 1.38
NEK4P51957 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.65■■□□□ 1.38
NEK4P51957 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.65■■□□□ 1.38
NEK4P51957 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.65■■□□□ 1.38
NEK4P51957 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NEK4P51957 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC23.65■■□□□ 1.38
NEK4P51957 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
NEK4P51957 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.65■■□□□ 1.38
NEK4P51957 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NEK4P51957 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
NEK4P51957 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
NEK4P51957 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
NEK4P51957 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
NEK4P51957 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
NEK4P51957 AC098818.2-201ENST00000564925 2320 ntBASIC23.64■■□□□ 1.38
NEK4P51957 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NEK4P51957 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NEK4P51957 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NEK4P51957 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NEK4P51957 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NEK4P51957 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.64■■□□□ 1.37
NEK4P51957 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NEK4P51957 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.64■■□□□ 1.37
NEK4P51957 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NEK4P51957 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.64■■□□□ 1.37
NEK4P51957 AC231657.2-201ENST00000624556 255 ntBASIC23.64■■□□□ 1.37
NEK4P51957 AC008694.1-202ENST00000636953 945 ntBASIC23.64■■□□□ 1.37
NEK4P51957 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
NEK4P51957 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NEK4P51957 RNF165-205ENST00000588679 2904 ntBASIC23.64■■□□□ 1.37
NEK4P51957 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NEK4P51957 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NEK4P51957 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
NEK4P51957 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NEK4P51957 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NEK4P51957 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.63■■□□□ 1.37
NEK4P51957 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.63■■□□□ 1.37
NEK4P51957 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
NEK4P51957 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK4P51957 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC23.63■■□□□ 1.37
NEK4P51957 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.63■■□□□ 1.37
NEK4P51957 AC018445.3-201ENST00000624177 1945 ntBASIC23.63■■□□□ 1.37
NEK4P51957 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK4P51957 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK4P51957 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK4P51957 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
NEK4P51957 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
NEK4P51957 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK4P51957 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.63■■□□□ 1.37
NEK4P51957 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
NEK4P51957 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.63■■□□□ 1.37
NEK4P51957 AC007322.1-201ENST00000426983 750 ntBASIC23.63■■□□□ 1.37
NEK4P51957 AL162430.1-201ENST00000480705 870 ntBASIC23.63■■□□□ 1.37
NEK4P51957 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.63■■□□□ 1.37
NEK4P51957 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.63■■□□□ 1.37
NEK4P51957 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK4P51957 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK4P51957 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK4P51957 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.63■■□□□ 1.37
NEK4P51957 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK4P51957 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.63■■□□□ 1.37
NEK4P51957 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
NEK4P51957 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NEK4P51957 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
NEK4P51957 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NEK4P51957 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms