Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHMP24386 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CHMP24386 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP24386 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP24386 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP24386 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.55■□□□□ 0.56
CHMP24386 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.55■□□□□ 0.56
CHMP24386 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CHMP24386 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP24386 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CHMP24386 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.55■□□□□ 0.56
CHMP24386 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP24386 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.55■□□□□ 0.56
CHMP24386 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.55■□□□□ 0.56
CHMP24386 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP24386 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP24386 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP24386 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP24386 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CHMP24386 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP24386 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP24386 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CHMP24386 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP24386 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CHMP24386 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP24386 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CHMP24386 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP24386 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP24386 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP24386 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP24386 MIR2861-201ENST00000636310 90 ntBASIC18.54■□□□□ 0.56
CHMP24386 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP24386 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP24386 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP24386 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP24386 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP24386 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP24386 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP24386 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP24386 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP24386 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP24386 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP24386 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP24386 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP24386 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP24386 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP24386 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP24386 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP24386 CYP21A1P-202ENST00000354927 1481 ntBASIC18.53■□□□□ 0.56
CHMP24386 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP24386 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CHMP24386 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP24386 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP24386 LSM12P1-201ENST00000411836 588 ntBASIC18.53■□□□□ 0.56
CHMP24386 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP24386 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.53■□□□□ 0.56
CHMP24386 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP24386 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CHMP24386 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP24386 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP24386 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP24386 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP24386 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.53■□□□□ 0.56
CHMP24386 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CHMP24386 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.53■□□□□ 0.56
CHMP24386 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHMP24386 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP24386 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP24386 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CHMP24386 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CHMP24386 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP24386 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP24386 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMP24386 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP24386 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.52■□□□□ 0.56
CHMP24386 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP24386 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP24386 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHMP24386 KRT18P68-201ENST00000392293 1000 ntBASIC18.52■□□□□ 0.56
CHMP24386 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.52■□□□□ 0.56
CHMP24386 PGM5P4-201ENST00000421970 445 ntBASIC18.52■□□□□ 0.56
CHMP24386 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CHMP24386 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.52■□□□□ 0.56
CHMP24386 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms