Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCK1P16333 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NCK1P16333 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
NCK1P16333 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCK1P16333 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCK1P16333 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCK1P16333 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCK1P16333 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NCK1P16333 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCK1P16333 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.77■□□□□ 0.6
NCK1P16333 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCK1P16333 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.77■□□□□ 0.6
NCK1P16333 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.77■□□□□ 0.6
NCK1P16333 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.77■□□□□ 0.6
NCK1P16333 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NCK1P16333 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.77■□□□□ 0.6
NCK1P16333 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
NCK1P16333 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NCK1P16333 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NCK1P16333 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NCK1P16333 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NCK1P16333 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.76■□□□□ 0.59
NCK1P16333 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCK1P16333 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.76■□□□□ 0.59
NCK1P16333 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.76■□□□□ 0.59
NCK1P16333 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
NCK1P16333 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCK1P16333 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCK1P16333 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.76■□□□□ 0.59
NCK1P16333 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.76■□□□□ 0.59
NCK1P16333 SUDS3P1-201ENST00000505831 966 ntBASIC18.76■□□□□ 0.59
NCK1P16333 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.76■□□□□ 0.59
NCK1P16333 CCDC92B-201ENST00000575506 885 ntBASIC18.76■□□□□ 0.59
NCK1P16333 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.76■□□□□ 0.59
NCK1P16333 AC243732.1-201ENST00000612648 864 ntBASIC18.76■□□□□ 0.59
NCK1P16333 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.76■□□□□ 0.59
NCK1P16333 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NCK1P16333 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 AL032819.2-201ENST00000624543 2162 ntBASIC18.75■□□□□ 0.59
NCK1P16333 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.75■□□□□ 0.59
NCK1P16333 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.75■□□□□ 0.59
NCK1P16333 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NCK1P16333 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.75■□□□□ 0.59
NCK1P16333 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
NCK1P16333 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.75■□□□□ 0.59
NCK1P16333 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NCK1P16333 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.74■□□□□ 0.59
NCK1P16333 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
NCK1P16333 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.74■□□□□ 0.59
NCK1P16333 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NCK1P16333 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.74■□□□□ 0.59
NCK1P16333 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.74■□□□□ 0.59
NCK1P16333 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.74■□□□□ 0.59
NCK1P16333 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
NCK1P16333 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.74■□□□□ 0.59
NCK1P16333 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.74■□□□□ 0.59
NCK1P16333 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCK1P16333 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCK1P16333 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
NCK1P16333 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.73■□□□□ 0.59
NCK1P16333 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.73■□□□□ 0.59
NCK1P16333 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCK1P16333 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.73■□□□□ 0.59
NCK1P16333 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NCK1P16333 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.73■□□□□ 0.59
NCK1P16333 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
NCK1P16333 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCK1P16333 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NCK1P16333 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.73■□□□□ 0.59
NCK1P16333 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms